CA2033658C - Glucose isomerases with an altered ph optimum - Google Patents

Glucose isomerases with an altered ph optimum Download PDF

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CA2033658C
CA2033658C CA002033658A CA2033658A CA2033658C CA 2033658 C CA2033658 C CA 2033658C CA 002033658 A CA002033658 A CA 002033658A CA 2033658 A CA2033658 A CA 2033658A CA 2033658 C CA2033658 C CA 2033658C
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glucose isomerase
amino acid
mutant
enzyme
glucose
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CA2033658A1 (en
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Anne-Marie Virginie Renee Lambeir
Ignace Lasters
Nadir Mrabet
Wilhelmus Johannes Quax
Jan Metske Van Der Laan
Onno Misset
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Bayer CropScience NV
Danisco US Inc
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Plant Genetic Systems NV
Genencor International Inc
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/90Isomerases (5.)
    • C12N9/92Glucose isomerase (5.3.1.5; 5.3.1.9; 5.3.1.18)

Abstract

A method for selecting amino acid residues is disclosed which upon replacement will give rise to an enzyme with an altered pH optimum. The method is specific for metalloenzymes which are inactivated at low pH due to the dissociation of the metal ions. The method is based on altering the pK a of the metal coordinating ligands or altering the K sss for the metal binding. New glucose isomerases with an altered pH
optimum are provided according to this method. These altered properties enable starch degradation to be performed at lower pH values.

Description

C F~ r~ c~ f~ r ~~'e:~~a~:.~~~
GIST-BROCADES N.V.
PLANT GENETIC SYSTEMS N.V.
NOVEL GLUCOSE ISOMERASES WITH AN ALTERED PH OPTIMUM
TECHNICAL FIELD
The present invention relates to the application of protein engineering technology to improve the properties of metalloenzymes. A method for selecting amino acids which upon alteration will influence the pH-activity profile of metal loenzymes is provided. Said method is applied to glucose isomerase. The present invention also provides mutated glucose isomerase molecules with an altered pH optimum.
Specifically the acidic flank of the pH-activity profile is shifted towards lower pH.
The present invention further provides recombinant glucose isomerases that advantageously can be applied in the production of fructose syrups, in particular high fructose corn syrups.
BACKGROUND OF THE INVENTION
Industrial application of ctlucose isomerase In industrial starch degradation enzymes play an impor-tant role. The enzyme a-amylase is used for liquefaction of starch into dextrins with a polymerization degree of about 7-10. Subsequently the enzyme a-amyloglucosidase is used for saccharification which results in a syrup containing 92-96%
glucose. The reversible isomerization of glucose into fructo-se is catalyzed by the enzyme glucose (or xylose) isomerase.
The correct nomenclature of this enzyme is D-xylose-ketol-isomerase (EC 5.3.1.5) due to the enzyme's preference for xylose. However, because of the enzyme's major application in the conversion of glucose to fructose it is commonly called glucose isomerase. The equilibrium constant for this isomeri-zation is close to unity so under optimal process conditions .fy f~, F'~, y~. !') Ci '~~ ~~
about 50~ of the glucose is converted. The equilibrium mixture of glucose and fructose is known as high fructose syrup.
Fructose is much sweeter to the human taste than gluco se or sucrose which makes it an economically competitive sugar substitute.
Many microorganisms which were found to produce glucose isomerase, have been applied industrially. A detailed review of the industrial use of glucose isomerases has been given by Wen-Pin Chen in Process Biochemistry, 15 June/July (1980) 30-41 and August/September (1980) 36-41.
The Wen-Pin Chen reference describes culture conditions for the microorganisms, as well as recovery and purification methods for the enzyme. In addition it also summarizes the properties of glucose isomerases such as the substrate specificity, temperature optima and pH optima, heat stability and metal ion requirement.
Glucose isomerase requires a bivalent ration such as Mgz+, Coz+, MnZ+ or a combination of these rations for its catalytic activity. Determination of 3D structures of diffe rent glucose isomerases has revealed the presence of two metal ions in the monomeric unit (Farber et al., Protein Eng.
1 (1987) 459-466; Rey et al., Proteins 4 (1987) 165-172 ;
Henrick et al., Protein Eng. 1 (1987) 467-475).
Apart from a role in the catalytic mechanism, bivalent rations are also reported to increase the thermostability of some glucose isomerases (M. Callens et al. in Enzyme Microb.
Technol. 1988 (10), 695-700). Furthermore, the catalytic activity of glucose isomerase is severely inhibited by Ag+, Hgz+, Cuz+, Zn2+ and Caz+.
Glucose isomerases usually have their pH optimum between 7.0 and 9Ø There are several reasons why it would be beneficial to use glucose isomerase at a lower pH value.
Three of these reasons ;
a) stability of the sugar molecules, b) adaptation both to previous and/or later process steps and c) stability of the enzyme, ~4J t.~ e.'t °::~ c~
will be further described below to illustrate this.
a) Under alkaline conditions and at elevated temperatures the formation of coloured by-products and the production of a non-metabolizable sugar (D-Psicose) are a problem. The desired working pH should be around 6Ø Around this pH
degradation of glucose and fructose would be minimal.
b) A lowered pH optimum is also desirable for glucose isome rase when this enzyme is to be used in combination with other enzymes, or between other enzymatic steps, for example in the manufacturing of high fructose syrups. In this process one of the other enzymatic steps, the saccharification by a-gluco-amylase is performed at pH 4.5, c) Most of the known glucose isomerases are applied at pH
7.5. This pH value is a compromise between a higher initial activity at higher pH and a better stability of the immobili zed enzyme at lower pH, resulting in an optimal productivity at the pH chosen (R. v. Tilburg, Thesis: "Engineering aspects of Eiocatalysts in Industrial Starch Conversion Technology", Delftse Universitaire Pers, 1983). Application of glucose isomerase at a pH lower than 7.5 could benefit from the longer half-life and, combined with an improved higher specific activity, would consequently increase the producti-vity of the immobilized enzyme at that lower pH.
From the above it can be concluded that there is need for glucose isomerases with a higher activity at lower pH values under process conditions.
Many microorganisms were screened for a glucose isome rase with a lower pH optimum. Despite many efforts, this approach did not lead to novel commercial glucose isomerases.
In order to be able to change pH-activity profile of glucose isomerases towards lower pH by protein engineering it is important to recognize the underlying effects which give rise to the rapid decrease in catalytic performance at acidic pH.

.T
~d v~ z.7 C3 'i.) eJ'' iu The role of metal ions in enzymes Two different functions far metal ions in enzymes can be envisaged.
First of all metal ions can have a structural role.
This means that they are involved in maintaining the proper 3D-structure and, therefore, contribute to the (thermo)stab ility of the enzyme molecule. An example of such a structural and stabilizing role is Ca2+ in the subtilisin family of 1o serine proteinases.
Secondly, metal ions can act as a cofactor in the catalytic mechanism. In this case the enzyme activity is strictly dependent upon the presence of the metal ion in the active site. The metal ion may for instance serve as a bridge between the enzyme and the substrate (e. g. Caz+ in phospholi-pase binds the phosphate group of the substrate) or it may activate water to become a powerful nucleophilic hydroxyl ion ( Z n2+-OH ) .
Examples are the Znz+-proteases such as thermolysin and carboxypeptidase, carbonic anhydrase (Zn2+), phospholipase-AZ
(Ca2+) staphylococcal nuclease (Ca2+) and alkaline phosphata ses (Mg2'', Caz+) . Examples of alpha/beta barrel enzymes which require cations to polarize a carboxyl or a carbonyl group in order to transfer hydrogen are glucose/xylose isomerase (Mg2+), ribulose-1,5-biphosphate carboxylase/oxygenase (RU-BISCO) (Mgz+) , enolase (Mg2+) , yeast aldolase (Mgz+, K~+) , mando-late racemase (Mgz+~, muconate cycloisomerase (Mn2+) . In the presence of metal chelating agents (such as EDTA), these enzymes loose their activity completely.
The binding of metal ions in a protein molecule usually involves coordination by 4 or 6 ligands. Depending on the type of metal ion, different ligands are found. For instance magnesium and calcium are usually liganded by oxygen atoms from either a carbonyl group of the protein main chain, a carbonyl group from a glutamine or asparagine side chain or the carboxylate from an aspartic- or glutamic acid side chain. Zinc and copper ions are usually liganded by nitrogen atoms from a histidine side chain or the sulfur atoms from .ra s~ F~1 ,t, " {.) rr iJ ;a ~> '::y eJ i.f cystein and methionine.
Factors determining the pH dependence of an enzyme 5 The activity of an enzyme is dependent on the pH value of the aqueous medium. This dependence is caused by the (de)protonation of ionizable groups in the active site of the enzyme on the one hand, and ionizable groups of the substra-te, or product (if present) on the other hand. Ionizable groups in proteins involve the side chains of the basic amino acids lysine, arginine and histidine (carrying a positive charge in the protonated form), and the acidic amino acids aspartic acid, glutamic acid, cystein and tyrosine (all carrying a negative charge upon deprotonation). Furthermore, the amino group of the N-terminus and carboxyl group of the C-terminus carry a positive and negative charge respectively.
The pKe-values of some amino acids are depicted in Table 1.
Table 1. Ionizable groups of amino acids as occurring in proteins [Cantor and Schimmel, 1980, Biophysical chemistry, W.H. Freeman, San Francisco]
pKe Positive charge (base) N-terminus 7.5-8.5 Lysine 10.5 Arginine 12.5 Histidine 6.0-7.0 Negative charge (acid) C-terminus 3.0-4.0 Aspartic acid 3.9 Glutamic acid 4.3 Cystein 8.3 Tyrosine 10.1 It should be realised that these pKe-values are valid for model compounds and that great variations both within and between different proteins occur, due to the specific envi-ronment of the ionizable group. Electrostatic effects are known to play a fundamental role in enzyme function and .. t 1 61 n a~) ~_I
r~.i 'J r~.% ?'. % ~1 ? ~':.7 v structures (see J.A. Matthew et al, CRC Critical Reviews in Biochemistry, 18 (1985) 91-197). The presence of a positive charge near an ionizable group will lower its pKe while a negative charge will cause an increase in pKe. The magnitude of the effect decreases with the distance between the ioniza-ble group and the charge. Moreover, the magnitude of this decrease is dependent upon the dielectric constant of the medium. Especially catalytic residues may reveal pKe-values which deviate from these averages (see for instance Fersht, Enzyme structure and mechanism, 1985, W.H. Freeman, New York).
The pH-dependence of an enzyme catalyzed reaction can be dissected into the pH-dependence of the Michaelis constant Km and the pH-dependence of the turn-over rate constant k~at (equivalent to Vex). These parameters represent the binding of the substrate in the ground-state and transition-state respectively. The pH-dependent (de)protonation of amino acid side chains which affect the binding of both substrate forms, or which are otherwise involved in the catalytic event (e. g.
proton uptake and release as in general base catalysis), therefore, determine the pH-activity profile of an enzyme.
For instance the protonation of the histidine in the catalytic triad of serine proteases (both the trypsin- and subtilisin family) is responsible far the loss of activity at lower pH-values (<7). In this case, the pKe of the enzyme activity is directly related to the pKe of this histidine re-sidue.
As a second example, the two aspartic acid residues in aspartyl proteases, such as pepsin and chymosin, can be mentioned. These groups determine the pH optimum of these proteases. The typical structural arrangement of the aspartic acids causes them to have different pKa-values leading to the bell-shaped pH-activity profile.
It is known that altering the surface charge by exten sive chemical modification can lead to significant changes in the pH dependence of catalysis. However in many cases this approach leads to inactivation and/or unwanted structural changes of the enzyme because these methods are rather ::1 f', ci 15. ~ nnl ~ f! r'.Y l.Y f3 ~~9 ~ '-i unspecific. Selective chemical modification of lysines in cytochrome c was shown to have an effect on the redox-poten-tial (D. C. Rees, J. Mol. Biol. 173, 323-326 (1980)). However, these results have been criticized because the bulky chemical reagent used far modification could perturb the structure of the protein.
Using the 3D-structure of a protein to anticipate the possibility of structural perturbation and site-directed mutagenesis, it is possible to modify the charge distribution in a protein in a very selective way.
Fersht and coworkers have shown that it is possible to manipulate the pH-activity profile of subtilisin by site-directed mutagenesis (Thomas et al, .Nature, 318, 375-376 (1985); Russell et al, J. Mol. Biol., 193, 803-813 (1987);
Russel and Fersht, Nature 328, 496-500 (1987)). Introduction of negat9.vely charged groups at 10-15A from the active site at the protein surface xaises the pKe value of the active site histidine. Conversely, making the surface more positive-ly charged lowers the pKe of the acidic groups. Changing either Asp99 at 13 Angstroms or G1u156 at 15 Angstroms from the active site to a lysine lowers the pKe of the active site histidine by 0.6 pH units. Changing both residues simultane-ously to give a double mutant with a change of four charge units, lowers the pKe by 1.0 pH unit. It appears that changes in Goulombic interactions can be cumulative.
Glucose isomerase mutants WO 89/01520 (fetus) lists a number of muteins of the xylose isomerase which may be obtained from Streptomyces rubiginosus and that may have an increased stability. The selection of possible sites that may be mutated is based on criteria differing from the ones used in the present inventi-on. More than 300 mutants are listed but no data are presen-ted concerning the characteristics and the alterations therein of the mutant enzyme molecules.

c>, <c. r.~ s..,, ,, , ~ .7 as Methodologies for obtaining enzymes with improved properties Enzymes with improved properties can be developed or found in several ways, for example by classical screening methods, by chemical modification of existing proteins, or by using modern genetic and protein engineering techniques.
Site-directed mutagenesis (SDM) is the most specific way of obtaining modified enzymes, enabling specific substi tution of one or more amino acids by any other desired amino acid.
suMMARx of TxE IrmEr~TIOrr The subject invention provides new mutant metalloenzy-mes obtained by expression of genes encoding said enzymes having amino acid sequences which differ in at least one amino acid from the corresponding wildtype metalloenzymes and which exhibit altered catalytic properties. Specifically, the pH-activity profile is altered by changing the overall charge distribution around the active sii=e.
In one of the preferred embodiments of the invention glucose isomerases are mutated.
It is another aspect of the invention to provide a method for selecting sites, in the wildtype enzyme, which can be explored by site-directed mutagenesis in order to modulate the pH-activity profile.
In still another aspect the present invention provides glucose isomerases with a more acidic pH optimum relative to the wildtype glucose isomerase.
BRIEF DESCRIPTIOIJ OF THE FIGURES
Figure 1 shows a schematic representation of the active site of glucose isomerase from Actinoplanus missouriensis, derived from the three dimensional structure of the glucose A1 5~ C, ~7 T~9' ) if "c,d '._td 'u.~ P.J
isomerase - xylitol complex. The inhibitor is shown in full detail in the centre of the figure. For the amino acid residues only those atoms are drawn which are involved in hydrogen bonding. Amino acid residue names are in boxes drawn with solid lines, solvent molecules are in boxes drawn with dashed lines . Metal binding sates are indicated by ovals numbered 395 and 580. Dashed lines indicate electrostatic interactions: the thin dotted lines represent hydrogen bonds, the fat dashed lines the proposed ligation of the metals.
Strictly conserved residues are marked by an asterix. For non-conserved residues the substitutions.found are indicated.
Figure 2 shows the alignment of amino acid sequences of glucose isomerases from different sources. The complete sequence of Actinoplanes missouriensis glucose isomerase is given. The amino acid sequence of Ampullariella glucose isomerase differs from that of the published sequences (Saari, J. Bacteriol., 169, (1987) 612) by one residue:
Proline 177 in the published sequence was found to be Argini-ne.
The Streptomyces thermovulgaris sequence has only been established up to amino acid 346. Undetermined residues are left blank. A dot indicates the absence of an amino acid residue at this position as compared to any of the other sequences. The different species are indicated by the follo-wing symbols:
Ami. . Actinoplanes missouriensis DSM 4643 Amp. . Ampullarella species ATCC31351 Svi. . Streptomyces violaceoruber LMG 7183 Smu. . Streptomyces murinus Sth. . Streptomyces thermovulgaris DSM

Art. . Arthrobacter species Bsu. . Bacillus subtilus Eco. . Escherichia coli Lxy. . Lactobacillus xylosus The secondary structure assignment was made in the 4', ,n ~s-? :. ~ "-~a e~ (y G"~ 'o.~' ~.:.,~ :,i 'J ;~.
structure of Actinoplanus missouriensis. The helices in the barrel are enclosed by solid lines. The B-strands are in the shaded boxes.
5 Figure 3 shows the pH-activity profile of glucose isomerase in the presence of 200 mM xylose and 10 mM magnesi-um (squares) and 1 mM manganese (circles).
Figure 4 shows the reaction scheme for the isomerisa 10 tion catalyzed by glucose isomerase in the presence of metal ions.
E = enzyme, S = substrate, M = metal ion, P = product.
Figure 5 shows the pH dependence of the reaction of glucose isomerase with xylose and Mg2+ as observed with steady-state experiments. K~, KZ, K3 and K4 are equilibrium constants explained in the text and in the reaction scheme given in Figure 4.
Figure 6 shows the pH-activity profile for the mutants K294R and K294Q in the presence of 200 mM xylose and 10 mM magnesium.
Figure 7 shows the pH-activity profiles for E186Q and E186D in the presence of 200 mM xylose and 10 mM Mgr+.
Figure 8 shows the pH-activity profiles for E186D and E186Q in the presence of 200 mM xylose and 1 mM MnZ+.
Figure 9 shows the pH-activity profile of the mutant D255N in the presence of 200 mM xylose and 1 mM manganese. .
Figures 10-20 show the normalized pH-activity profi-les for the following mutants:
F254K (Fig.lO), F94R (Fig.l1), F61K (Fig.l2), A25K (Fig.l3), D57N (Fig.l4), L258K (Fig.l5), Q204K (Fig.l6), R23Q (Fig.l7), H54N (Fig.l8), H290N (Fig.l9), T95D (Fig.20).
Conditions axe mentioned in the Figures.

4~ !iA °~'_l p~ ~..~~, l~!
'v Cap .'.J 7.j E.J l~
Figure 21 shows the normalized pH-activity profile far mutant F61KK253R. Conditions are mentioned in the Figure.
DETAILED DESCRIPTION OF THE INVENTION
The present invention describes the modification of enzymes to improve their industrial applicability. The invention makes use of recombinant DNA techniques. Such techniques provide a strong tool for obtaining desired amino acid replacements in the protein of choice. Because of the virtually unlimited amount of possible amino acid replace-ments it is preferable to use a selective approach. The present approach relies on the well coordinated application of protein crystallography, molecular modelling and computa-tional methods, enzymology and kinetics, molecular biology and protein chemistry techniques. The strategies for the identification of targeted mutations are innovative in the 2o sense that it is recognized that point mutations rarely cause only local perturbations. Mutations generally affect several different properties of the protein at once. Therefore, although the disclosed strategies make use of well establis-hed structure-function relationships, they also provide a rational way to avoid or correct unwanted alterations of secondary properties.
Extensive biochemical investigation of the designed mu-tants results in the identification of mutants with improved properties.
By 'improved properties° as used herein in connection with the present glucose isomerase enzymes we mean enzymes in which the acidic flank of the pH-activity profile shifted towards a more acidic pH optimum relative to the correspon-ding wildtype enzymes.
It was established that the pH-activity profile of wildtype glucose isomerase reveals a decrease in activity at both acidic pH below 7.0 and at alkaline pH beyond pH 8.0 n r, r ~ ,:-., a, :., ~-.i ~';i 'iF~ .'Vii.? ~ei ui (Example 1 - Figure 3). As discussed earlier it would be preferable to use glucose isomerase at lower pH.
Surprisingly, it was found that the drop in activity at the acidic side of the pH-activity profile is caused by the protonation of one or more amino acid side chains, which are directly involved in the coordination of the catalytic metal ion of glucose isomerase. This was deduced from the fact that the apparent association constants for metal binding, as determined by steady-state kinetics, showed a similar pH-dependency (Example 1 - Figure 5) . This can be described by the following model:
Kass site + Mgz~ .~ ~ site:MgZø
1 ~
pKa site: H+
2o in which "site" refers to the geometrical binding site composed of the different (ionizable) ligands. The enzyme is only active when the site is occupied by an Mg2~-ion, which, in turn, can only bind to the unprotonated metal binding site ("site") and not the protonated one ("site:H+"). The pH-dependent protonation of the metal binding site is characte rized by the pKa, whereas the metal binding to the unprotona ted site is characterized by the association constant Kass.
The apparent association constant for metal binding is a function of the true Kess, the pKa and the pH and can be described as follows:
K apparent - K * ( 1 + 10~a-PH>)-1 ass ass The rate of the reaction is proportional to the fracti-on of the enzyme molecules which is complexed with Mg2+. This fraction increases at a higher [Mg2+]*Kesse~'arent.
Although the presented model was described after an observation made in glucose isomerase, it is obviuous that 4o this model, and the method derived therefrom, can be used for metalloenzymes in general, provided that the inactivation at low pH is due to the dissociation of the metal ions.

Fa r) 6'~ G! .''~! ~~~ :;) re 1J te' ~,s" t.9 eW .a The drop in activity observed at alkaline pH is due to a decrease in the maximal velocity (VAX), reflecting the deprotonation of an amino acid residue that is essential for the catalytic mechanism.
Krom the model described above, which can be used to explain the decrease in activity at the acidic side of the pH-activity profile, it can be deduced that in order to increase the activity of glucose isomerase at lower pH
values, Kess has to be increased and/or the pKe has to be decreased.
Therefore, in one embodiment of the invention, DNA
sequences coding for metalloenzymes such as glucose isomera-ses are mutated in such a way that the mutant proteins reveal a change in the pH-activity profile as a result of a change in pKe of amino acid side chains acting as ligands in the metal binding.
Shift of the pH-activity profile of metalloenzymes to lower pH. by changing the pK of amino acid side chains In order to shift the pK~'s of metal coordinating ligands to a mare acidic pH, residues have to be introduced which increase the overall positive charge around the metal binding site of metalloenzymes. Consequently, the pH depen-dence of the activity of metalloenzymes, for which the activity at the acidic side of the pH optimum is caused by the pKe of metal binding, will change accordingly. This charge alteration will stabilize the negative charge of the ionizable groups which are responsible for the pH dependence of the metal binding through long range electrostatic ef-fects.
According to a preferred embodiment the shift of the pH-activity profile of glucose isomerase to a more acidic pH
is achieved by increasing the overall positive charge around the active site of glucose isomerase.

f,~drF? yn:.~q,~
~r't~vec'~~U
Around neutral pH a net increase in positive charge can be obtained by:
- replacing a negatively charged residue (Asp or Glu) by a neutral one - replacing a neutral residue by a positively charged one (Arg or Lys) - replacing a negatively charged residue by a positive-ly one.
F'or the selection of residues, which are suitable to be mutated, the following criteria can be formulated:
I. Select those positions at which substitution will lead to a net increase in positive charge within a 15 Ang-stroms radius around the target residues. The target residues are the ionizable groups which are involved in the coordination of the cation.
Eliminate from this collection:
- All positions that already contain a positive charge:
:arginine or lysine.
- All positions that cannot harbour an arginine or a lysine because these residues would lead to inadmissible Van der Waals overlap with the backbone atoms of the protein.
- All positions at which an arginine or a lysine would need extensive adaptation of additional positions in the direct environment in order to avoid Van der Waals overlap.
- All positions at which substitution into arginine or lysine would lead to a buried uncompensated charge in a hydrofobic cluster.
- All positions at which residues should not be repla-ced because they are involved in typical structural arrangements such as: salt bridges, packing of heli-ces, stabilization of helices by keeping a negative charge at the start of a helix, initiation of heli-ces, e.g. prolines at the start of a helix, Phi-psi n ... 1~
N ~ C.s~
angles which are outside the allowed region for the residue that is going to be inserted.
II. In a preferred embodiment the following amino acids a r a 5 also eliminated from the collection:
- All residues that are implied in catalysis, cofactor binding (such a metal ions and nucleotides) - All positions that appear to be strictly conserved among homologous enzymes (if available).
III. Subsequently a priority can be attributed to each possible mutation site. This is done by inspection of the structural environment of the residue, the distance to the 'target' residues, the hydrogen bonding pattern in which the residue at said site is involved and the solvent accessibility.
In order to avoid masking of the electrostatic interactions by counter-ions, introduction of charges at sites which can not be shielded from the target residues by solvent, are to prefer. So in general, due to the difference in dielectric properties between the protein and the solvent, charges, which cannot be solvated completely due to the fact that they are buried in the interior of the protein or partially buried in clefts on the protein surface, are more likely to cause effects than charges that axe complete-ly solvated. Moreover, in the case of glucose isomera-se, the conversion of glucose into fructose is perfor-med at low ionic strength, and therefore, shielding by counter-ions is expected to interfere less seriously with the newly designed charge-charge interactian in the novel glucose isomerase described within the embo-diment of the invention.
Criteria for the assignment of low priority to the above selected sites, when replacing into a positive charge are ~, fn F~ !:7 ~ -.~ fl t 16 d '~ ~' ~a w~.~ :3 - The introduction of a positive charge and/or elimina-tion of a negative charge will affect the integrity of the quaternary structure.
- The site is completely solvent accessible so that an introduced charge is expected to be shielded from the target residues by the solvent, which therefore will diminish the effect on pKa of the target residues.
Likewise, increasing the overall negative charge around the metal binding site will shift the pKe's to more basic pH-values.
Shift of the pH-activity profile of metalloenzymes to lower pHf by increasing Kess for the metal bindinrr Tn another preferred embodiment of the subject inven-tion the shift of the pH-activity profile to a lower pH is achieved by increasing the KISS.
The shift of the pH-activity profile of metalloenzymes to a more acidic pH can be achieved by increasing the associ ation constant for metal binding. The association constant fox metal binding can be increased by optim..zation of the coordination of the metals by the ligands. This may be realised by the introduction of better ligands or by introdu cing more ligands. Electrostatic interactions can contribute to the association constant for metal binding over much longer distances.
In another preferred embodiment the acidic flank of the pH-activity profile of glucose isomerase is shifted to lower pH by increasing the association constant for metal binding.
Glucose isomerase binds two magnesium ions per subunit, resulting in the binding of eight cations per tetramer, thereby increasing the total charge by +16 (see Figure 1).
Both binding sites are located at the C-terminal end of the fi-barrel. The 'Down' binding sites is located rather deep in the barrel and, in the xylitol complex, directly binds two oxygens from the inhibitor. The second binding site ('Up') is located near the end of the B-barrel, close to the active ~J~1~~4~~,r~'!) f~,~~~~aY~-~~j site cleft and the subunit interface.
In general, when a positively charged ion binds to a second particle, the association and dissociation rate constants as well as the overall equilibrium affinity con-s stant will depend upon the charge of the second particle.
Repulsion occurs when the particle is also positively charged and attraction occurs between opposite charges. For small ions, and in certain cases also proteins, this effect can be quantified by studying the ionic strength dependence of the reaction rate. The rate of association of oppositely charged ions will decrease with increasing ionic strength, the rate of association of the same charges will increase with increa-sing ionic strength, and when one of the particles is not charged there is no effect of the ionic strenght.
The affinity of glucose isomerase for magnesium decrea-ses with increasing ionic strength which is consistent with an overall negative charge of the glucose isomerase binding site. The binding of the cation may be altered by the intro-duction of a charged amino acids at the protein surface along the trajectory of the cation upon entrance of the active site. More specifically, this invention relates to the use of electrostatic farces to alter the association rate constant of the cation. Glucose isomerase may be engineered to increa-se the association rate for the cation by the addition of negative charge (or deletion of positive charge) near the active site channel, or to decrease the association rate for the cation by the addition of positive charge (or deletion of negative charge) near the active site channel. Since the off-rate is not expected to be affected substantially, an altered on-rate will result in an altered overall association con-stant of the canon. Since the loop regions situated at the C-termini of the B-barrel shape the active site entry, the possible mutation sites are searched in these regions. To avoid possible interference with barrel stability, substi-tutions in B-strands or a-helices will not be considered. The following rational may be used:

b~ a a s ,r' ~~~
~~J~~~~~~~t~

- Select all residues in the region between the C-terminal ends of the !3-strands and the N-terminal ends of the a-helices.
- Reject from further consideration all residues where substitution leads to a decrease of the net positive charge in a sphere of 15 Angstroms radius around the metal ligands. Introduction of negative charges too close to the metal binding side will shift the pKe of the metal ligands to a higher pH, which will cancel out the effect of increased Kess at low pH.
- Compute for each of the remaining residues its accessible surface area in the context of the protein and using a probe of radius 1.4 A. Reject residues that are buried in the sense that they have less than 10 k2 accessible surfa-ce area.
BTRUOTURAh INFORMATION
Information on the 3D structure of the enzyme (or enzyme: substrate or enzyme: inhibitor complex) is of great importance to be able to make predictions as to the mutations which can be introduced.
Structural data have been reported for glucose isomera se of Streptomyces rubiainosus (Carrell et al, J. Biol. Chem.
259 (1984) 3230-3236); Carrell et al. Proc. Natl. Acad. Sci USA 86, (1989) 440-4444) Streptomyces olivochromoaenus (Farber et al, Protein Eng. 1, (1987) 467-475; Farber et al.
Biochemistry 28 (1987) 7289-7297), Arthrobacter (Hendrick et al., J. Mol. Biol. 208 (1989) 127-157) and Strepto~ces albus (Dauter et al FEES Lett. 247, 1-8).
Although not all amino acid sequence data are available for these enzymes the 3D-structural homology with Actinopla-nes missouriensis glucose isomerase is striking (see F. Rey et al., Proteins 4 (1988) 165-172). To show the general applicability of the method disclosed in this specification the genes for glucose isomerase originating from various species have been cloned and sequenced. The amino acid h'e w ~s~ ti vj tJV' i.~ V

sequences of glucose isomerases as deduced from the genes of Streptomyces violaceoruber, Streptomyces murinus, Arthrobac-ter spec. and Streptomyces thermovulga~ ris are shown to be homologous. Published amino acid sequences for the glucose isomerases of AmQullariella sp. (Saari, ibid.) and Streptomy-ces violaceoniaer (Nucl. Acids Res. 16 (1988) 9337), deduced from the nucleotide sequences of the respective genes, display a close homology to Actinoplanes missouriensis glucose isomerase. In addition, WO 89/01520 discloses that the amino acid sequence of Streptomyces rubiginosus glucose isomerase is homologous to Ampullariella sp. glucose isomera-se.
Despite the absence of 3D structural data for most glucose isomerases, it can be concluded that all glucose isomerases from Actinomvcetales have a similar tetrameric organisation.
In general, it can be assumed that where the overall homology is greater than 65%, preferably greater than 74%
(minimal homology between Actinoplanes missouriensis and Stre~tom5rces glucose isomerase, according to Amore and Hollenberg, Nucl. Acids Res. 17, 7515 (1989)), and more preferably greater than 85~ and where the 3D structure is similar, amino acid replacements will lead to similar changes in pH optimum. Specifically one expects the glucose isomera-ses from species belonging to the order of the Actinomyceta-les to have such a high degree of similarity that the altera-tion of pH optimum due to amino acid replacements at the selected sites are similar. Actinoplanes missouriensis is the preferred source of glucose isomerase to mutate.
Figure 1 gives a schematic presentation of the active site of the glucose isomerase from Actinoplanes missourien-sis.
Figure 2 shows the aligned amino acid sequences of various glucose isomerases.
In the present specification both the three letter and the one letter code for amino acids is used (see e.g. Stryer, L. Biochemistry, p.13, 2nd ed, W.H. Freeman and Comp., NY, 1981).

.y re t.'7 a~ « t rd ~Sl 2a C~ :, EXPERIMENTAL
Cloning and expression of the D-alucose isomerase 5 D-glucose isomerase (GI) is synonymously used for D-xylose isomerase ((D-xylose) ketol-isomerase, EC 5.3.1.5), an enzyme that converts D-xylose into D-xylulose. The D-glucose isomerase from Actinoplanes missouriensis produced by engi-neered E. coli strains is designated as EcoAmi (DSM) GI. To 10 distinguish the Actinoplanes missouriensis gene coding for GI
from the ,analogous E. coli xyiA gene, the former will be designated as GI.
Methods for manipulation of DNA molecules are described in Maniatis et al. (1982, Cold Sprang Harbor Laboratory) and 15 Ausubel et al. (1987, Current Protocols in Molecular Biology, John Wiley & Sons Inc. New York). Cloning and DNA sequence determination of the glucose isomerase gene from Actinoplanes missouriensis DSM 43046 is described in EP-A-0351029.
The derived amino acid sequence of GI is numbered and compa 20 red with other glucose isomerases in Figure 2. In the follo wing, the numbering of amino acids refers to Figure 2.
Wildtype and mutant GI enzymes were produced in E.
coli strain K514 grown as described in EP-A-0351029.
Assav of the enzymatic activity of the expression",product The enzymatic activity of glucose isomerase was assayed as described below (1 unit of enzymatic activity produces 1.0 micromole of product -D-xylulose or D-fructose-per minute;
therefore, specific activity -spa- is expressed as units per mg of GI enzymes).
GI activity can be assayed directly by measuring the increase in absorbance at 278 nm of xylulose produced at 35°C
by isomerisation of xylose by glucose isomerases. This assay was performed in 50 mM triethanolamine buffer, pH 7.5, containing lOmM MgS04, in the presence of 0.1 M xylose.
Glucose isomerase final concentration in the assay was ~ 0.01 ,a'~;,?~~~-~r..~;) ~~~i~ i. r _.~ ~ :'...~ lJ

mg/ml, and precisely determined, prior to dilution in the enzymatic assay mixture, by absorption spectroscopy using an extinction coefficient of 1.08 at 278 nm for a solution of enzyme of 1.0 mg/ml.
The specific activity was determined in the D-Sorbitol Dehydroaenase Coupled Assay, enzymatic determination of D-xylulose was performed at 35°C as previously described (Kersters-Hilderson et al., Enzyme Microb. Technol. 9 (1987) 145) in 50mM triethanolamine, pH 7.5, lOmM MgS04, and 0.1 M
xylose, in the presence of ~ 2 x 10-8 M D-sorbitol dehydroge-nase (L-iditol . NAD oxidoreductase, EC 1.1.14), and 0.15 nM
NADH, except that the incubation buffer also included 1mM
ethylenebis(oxyethylenenitrilo)tetraacetic acid (EGTA).
Glucose isomerase final concentration in this assay was ~ 2.5 x 10 3 mg/ml, and precisely determined as described above.
With glucose as a substrate GI activity can be assayed by the measurement of D-fructose produced during the isomeri-zation reaction using the cysteine-carbazole method (CCM) which is based on the reaction of ketosugars with carbazole in acids to yield a purple product (Dische and Borenfreund, J. Biol. Chem. 192 (1951) 583).

The pH dependence of~lucose isomerase activity In order to determine the pH-activity profile of wild-type and mutant glucose isomerase, the activity was measured as a function of pH (5.2-8.0) in the presence of 10 mM MgS04 and 200 mM xylose (using the direct assay method). For mutants with very low activity the coupled sorbitol dehydro-genase assay system was used between pH 5.8 and 8.4. Care was taken that the sorbitol dehydrogenase reaction did not become rate limiting at extreme pH values.
The pH-activity profile of glucose isomerase (i.e. the recombinant wildtype enzyme from Actinoplanus missouriensis) s' j f?) ='. '~ ~,'?~ " ~,e NM ~C..iG..~~e~\t in the presence of 200 mM xylose and different activating canons is shown in Figure 3.. xt reveals a decrease in activity at both acidic pH below 7.0 and at alkaline pH
beyond 8Ø
The appropriate steady-state kinetic mechanism for glucose isomerase involves the :rapid formation of an enzyme-metal-sugar complex which is converted to the product in a rate limiting step (so called rapid equilibrium, random ordered mechanism - see Figure 4). Equilibrium and transient l0 kinetic fluorescence measurements (stopped flow) indicate the presence of two metal ion binding sites. In the stopped flow experiment the metal ions bind consecutively. The high affinity metal plays a role in maintaining an active confor-mation and is therefore called the °conformational' site. The second metal binding site accommodates the activating cation, therefore this site is usually indicated as the 'catalytic°
site. The reaction scheme which is shown in Figure 4 appears to be adequate to analyze and compare steady-state and stopped flow experiments. In principle steady-state .results do not distinguish between the two metal binding sites, but it is assumed that the main effect comes from the catalytic metal binding.
Analysis of the initial rate (v) of xylose conversion as a function of the xylose and magnesium concentrations allows to determine four parameters: the maximal velocity, the equilibrium constants for magnesium binding to the free enzyme (K~), the enzyme-sugar complex (K4), and the equili-brium constants of xylose binding to the free enzyme (KZ) and the enzyme-magnesium complex (K3).

_ 1 + _---~- + --- +
v K3*[S] K4*[M] K3*K~*[S]*[M]
where [M] and [S] represent the concentration of the metal ion and xylose respectively.

x r, s~y r~, rn r.. ; ~
rJ ~ij ~h1' ': i~ '~~ Pj li By systematic variation of the magnesium ion and the xylose concentrations it was possible to obtain values for the maximal velocity and for all four equilibrium constants.
Figure 5 shaws the pH dependance of these parameters.
5 Comparison of the results of Figures 3 and 5, shows that the acidic side of the pH profile is completely determi-ned by the metal ion binding.
The data of Figure 5 are not sufficiently accurate to calcu late the number of ionizations involved. The slope of the plots of logK~,4 vs pH (slope > 1) indicates however, that more than' one ionization may be involved. The similarity in pH dependence of K~ and K4 indicates that the same ionizing groups are important for both these processes (involving the same site).

Selection of amino acid residues in glucose isomerase of which substitution will alter the uK values of the metal binding, ionizable amino acids In the case of glucose isomerase, the criteria for the selection of possible positions for substitution, as outlined in the detailed description of this invention, were applied using the aligned sequences from different sources (Figure 2) and the highly refined structure of Actino~lanes missourien-sis glucose isomerase in complex with the inhibitor xylitol (see Figure 1 and "Structural Information" in the "Detailed description of the invention"). The highly refined structure with a resolution of 2.2 Angstroms reveals the position of the inhibitor and two metal banding sites. A schematic representation of the active site of glucose isomerase of Actinoplanes missouriensis is given in Figure 1.
From the glucose isomerase structure complexed with cobalt and xylitol those residues were selected where substi tution into a more positively charged amino acid residue leads to a net increase in positive charge within a 15 Ang strom radius around the target ionizable groups. In the case ,y J' ~~;E ~:;J ~~ w ( ) °~'Uki~';J~i.i of glucose isomerase the targets are the ionizable goups that are involved in the coordination of the metal ions required for activity. These target ionizable groups imply the car boxylgroups of G1u181, G1u217, Asp245, Asp255, Asp292 and the NE of His220.
After application of criterion I, 80 possible mutation sites were retained. These sites are summarized below:
Alas, Phell, Leul5, Trp20, G1n21, A1a25, Phe26, Asp28, A1a29, G1y47, Tyr49, Thr52, Phe53, His54, Asp56, Asp57, Phe6l, I1e85, Met88, Phe94, Thr95, Phe104, G1n122, Thr133, Leu134, Va1135, A1a143, Tyr145, Tyr158, Asn163, Ser169, G1u181, Asn185, G1u186, G1y189, I1e191, Pro194, His198, G1n204, Leu211, Phe212, Asn215, G1u217, Thr218, His220, G1u221, G1n222, Ser224, Asn225, Leu226, Phe228, Thr229, G1y231, Leu236, His238, His243, Asp245, Asn247, His250, Phe254, Asp255, G1n256, Asp257, Leu258, Va1259, Phe260, His262, Leu271, Tyr285, Asp286, His290, Asp292, Tyr293, Thr298, G1u299, Trp305, A1a310, Met314, Va1380, Asn383.
After discarding the catalytic residues and the strictly conserved residues (criterion II) the following 62 residues are left:
Ala5, Leul5, G1n21, A1a25, Phe26, Asp28, A1a29, G1y47, Tyr49, Thr52, Asp56, Phe6l, I1e85, Met88, Thr95, Phe104, G1n122, Thr133, Leu134, A1a143, Tyr145, Tyr158, Asn163, Ser169, Asn185, G1y189, I1e191, Pro194, His198, G1n204, Leu211, Phe212, Thr218, G1n222, Ser224, Asn225, Leu226, Phe228, Thr229, G1y231, Leu236, His238, His243, His250, Phe254, G1n256, Asp257, Leu258, Va1259, His262, Leu271, Tyr285, Asp286, His290, Tyr293, Thr298, G1u299, Trp305, A1a310, Met314, Va1380, Asn383.
Subsequently a priority was attributed to each of these 62 possible mutation sites according to criterion III.
The following 24 sites were attributed as having high priori-~~ ~ ~:,~ v i3 e~ L7 ty for mutagenesis: A1a25, G1y47, Tyr49, Thr52, Phe6l, I1e85, Thr95, G1n122, Thr133, Tyr145, Tyr158, G1y189, I1e191, G1n204, Thr218, G1n222, Leu226, Thr229, G1y231, Leu236, G1n256, Leu258, Tyr293 and 'Va1380.

Mutation of either one or several of the 80 selected amino acid residues into positively charged residues will result in a decrease of the pKa of metal binding of glucose isomerase. This may result in a corresponding shift of the 10 pH-activity profile towards lower pH.
Correspondingly, mutation of either one or several of the 80 selected amino acid residues into negatively charged res~_dues will result in an increase of the pKe of metal binding of glucose isomerase. This may result in a correspon-15 ding shift of the pH-activity profile towards higher pH.
EXADiPLE 3 The effect of mutatinct Lys 294 on the pH-activity profile At position 294 in glucose isomerase a positive charge is located about 8 Angstroms from the highest occupied metal binding site in the glucose isomerase-xylitol complex (395 in , Figure 1). A mutation at this site was made, replacing the lysine for an arginine. This mutation conserves the positive charge at position 294. Consistent with this conservation of the positive charge is the observation that the pH-activity profile of this mutant is similar to that of the wildtype enzyme.
However, when at position 294 the positive charge is removed by replacing lysine 294 by a glutamine we observed a shift of the pH-activity profile towards the alkaline site by approximately 0.5 pH units. The pH-activity profiles for K294R and K294Q are shown in Figure 6.
This example illustrates that it is possible to manipu-late the pKe of one or more functional groups, in the active site of glucose isomerase, by changing the net charge of the protein around the active site.

r~~~S4.as~~z,,41 rJ~~Gdia~e~L) The effect of mutatina G1u186 and replacincLmaamesium ions by manaanese ions on the pH-activity profile Tn the mutant E186Q a negative charge is replaced by a neutral one which gives rise to a net increase in positive charge within a 15 Angstroms radius around the metal ligands.
The pH-activity profile of the E186Q mutant in the presence of magnesium is shown in Figure 7. The alkaline flank of the pH profile is shifted significantly toward lower pH. In the presence of manganese instead of magnesium the pH-activity profile of E186Q is shifted to a lower pH and at its optimum pH its activity is higher than for the wildtype (Figure 8) .
For applications where metal ions other than magnesium can be used the combination E186Q with manganese at low pH is an interesting option.
We also performed the mutation E186D which is conserva tive with respect to charge. The pH-activity profile of this mutant is shown in Figures 7 and 8. The pH dependence of the activity for the E186D mutant is not significantly different from that of the wildtype enzyme. Removal of the negative charge at position 186 did shift the pH activity profile to a more acidic pH. This example emphasizes that the rationale of the mutation E186Q holds.

The effect of replacina As~255 on the pH-activity profile Substitution of the negatively charged aspartic acid at position 255, which is in fact a metal binding ligand in glucose isomerase, by a neutral asparagine, gives rise to a shift of the pH-activity profile towards lower pH in the presence of manganese. The pH optimum shifts about 2 pH units towards more acidic pH.
The pH-activity profile is given in Figure 9.

~rys~Ea~i~ S
°~JJ '~
cs L'~ J l~

EXAPiPhE 6 Glucose isomerases with an a:Ltered pH-activity Qrofile Mutants of glucose isomerase which were created accor-ding to the methods as outlined in the detailed description of the invention, were tested for their pH-activity relation under conditions which are indicated in the Figures (l0-20).
The pH-activity profile of a mutant is the result of the effect of the mutation on the pKe on the one hand, and the effect on the Kess on the other hand.
The results for the following mutants are given in the Figures:
F254K (Fig.lO), F94R (Fig.l1), F61K (Fig.l2), A25K (Fig.l3), D57N (Fig.l4), L258K (Fig.lS), Q204K (Fig.l6), R23Q (Fig.l7), H54N (Fig.l8), H290N (Fig.l9), T95D (Fig.20).
For the mutants in which a positive charge (F254K, F94R, F61K, A25K, L258K, Q204K) was introduced or a negative charge neutralized (D57N), it can be seen that the acidic-side of the pH-activity profile is shifted towards lower pH.
For mutants in which a negative charge was introduced (T95D) or a positive charge was neutralized (R23Q, H54N, H290N, it can be seen that the pH-activity profile is shifted towards higher pH.
Both of these observations are in agreement with the model as presented in the detailed description of the inven-tion.
However, it should be noted that mutants in which a conserved amino acid has been replaced (F94R, D57N, H54N) give a drastic decrease in specific activity on xylose. At position 254 in the sequence alignment (Fig. 2) only hydrop-hobic amino acids are found. Introduction of a charged amino acid (F254K) at this position also leads to a drastic decrea-se in specific activity. Thus, it can be concluded that although (semi)conserved amino acid positions can be used to alter charges in order to modify the pH-activity profile they 6 d s rd a~) r''a ~ "' ~) are not preferred sites.

Stabilization of mutants with an altered QH optimum to obtain better performance under application conditions The mutants H290N and F61K give the expected shift in the pH-activity profile as described in Example 6. Of these mutants H290N was immobilized as described in EP-A-351029 (Example 7). Application testing of the wildtype arid this mutant glucose isomerase was performed as described in the same application (Example 8). The stability is indicated by the first order decay constant (Kd, the lower the decay constant the more stable the enzyme). Table 2 gives the Kd values for the wild-type and mutant glucose isomerases.
Table 2 Decay constants for wildtype and mutant glucose isomerase, immobilized on Lewatit Kd (X 106 SeC ~) Wildtype 2.5 H290N 3.1 K253R 0.7 H290NK253R 1.6 F61KK253R 1.4 As can be seen in Table 2, H290N is destabilized as compared with the wildtype glucose isomerase. K253R was found to stabilize the wildtype glucose isomerase by a factor larger than three. The pH-activity profile of the K253R
mutant is identical with that of the wildtype enzyme.
The combination of the pH mutant H290N with the stability mutant K253R shows that pH mutants can be stabilized by introducing mutations that have been shown to stabilize the wildtype enzyme.
In addition Table 2 shows that pH mutant F61K is stabi-lized with respect to the wiltype enzyme after introduction ~,~, r. ,:~ <~~

of K253R.
The acidic shift of the pH-activity profile of F61K is maintained iri the double mutant (Fig. 21). This shows that mutations which improve different properties of an enzyme can be combined in a new mutant which harbours the improved properties of the individual mutations (an improved pH
optimum arid an improved stability in this case).
Tt is to be understood that the above mentioned exam-ples are meant to demonstrate the concept of the invention and that they are not meant to limit the scope. In view of this it should be clear that combinations of the above mentioned mutations with other mutations leading to altered characteristics, e.g. thermostability, metal binding or substrate specificity, are also encompassed by the subject invention.

Claims (16)

The embodiments of the invention in which an exclusive property or privilege is claimed are defined as follows:
1. A mutant glucose isomerase, obtained by the expression of a gene encoding said glucose isomerase, differing in at least one amino acid residue from the wildtype enzyme by having an amino acid substitution within a sphere of 15 .ANG. around a metal ion coordination site and characterized in that it exhibits an altered pH-activity profile.
2. A mutant glucose isomerase according to Claim 1, characterized in that the altered pH-activity profile or at least the acidic part thereof is shifted towards a lower pH
value.
3. A mutant glucose isomerase according to Claim 1 or 2, characterized in that the amino acid substitution is to a more positively charged residue.
4. A mutant glucose isomerase according to Claim 1, characterized in that the altered pH-activity profile or at least the acidic part thereof is shifted towards a higher pH
value.
5. A mutant glucose isomerase according to Claim 1 or 4, characterized in that the amino acid substitution is to a more negatively charged residue.
6. A mutant glucose isomerase according to any one of Claims 1 to 5, wherein the wildtype enzyme is obtained from a microorganism of the order Actinomycetales.
7. A mutant glucose isomerase according to Claim 6, wherein the wildtype enzyme is obtained from Actinoplanes missouriensis.
8. A mutant glucose isomerase according to Claim 1, wherein the wildtype enzyme is obtained from Actinoplanes missouriensis and wherein said amino acid substitution is at at least one of the following amino acid positions shown in sequence Ami in Figure 2, or at a corresponding position in a homologous glucose isomerase, replaced by an amino acid not found in the wildtype enzyme:
Ala5, Phe11, Leu15, Trp20, Gln21, Ala25, Phe26, Asp28, Ala29, Gly47, Tyr49, Thr52, Phe53, His54, Asp56, Asp57, Phe61, Ile85, Met88, Phe94, Thr95, Phe104, Gln122, Thr133, Leu134, Val135, Ala143, Tyr145, Tyr158, Asn163, Ser169, Glu181, Asn185, Glu186, Gly189, Ile191, Pro194, His198, Gln204, Leu211, Phe212, Asn215, Glu217, Thr218, His220, Glu221, Gln222, Ser224, Asn225, Leu226, Phe228, Thr229, Gly231, Leu236, His238, His243, Asp245, Asn247, His250, Phe254, Asp255, Gln256, Asp257, Leu258, Val259, Phe260, His262, Leu271, Tyr285, Asp286, His290, Asp292, Tyr293, Thr298, G1u299, Trp305, Ala310, Met314, Val380, Asn383.
9. A mutant glucose isomerase according to Claim 1, wherein the wildtype enzyme is obtained from Actinoplanes missouriensis and wherein said amino acid substitution is at at least one of the following amino acid positions shown in sequence Ami in Figure 2, or at a corresponding position in an homologous glucose isomerase, replaced by an amino acid not found in the wildtype enzyme:
Ala5, Leu15, Gln21, Ala25, Phe26, Asp28, Ala29, Gly47, Tyr49, Thr52, Asp56, Phe61, Ile85, Met88, Thr95, Phe104, Gln122, Thr133, Leu134, Ala143, Tyr145, Tyr158, Asn163, Ser169, Asn185, Gly189, Ile191, Pro194, His198, Gln204, Leu211, Phe212, Thr218, Gln222, Ser224, Asn225, Leu226, Phe228, Thr229, G1y231, Leu236, His238, His150, Phe254, Gln256, Asp257, Leu258, Val259, His262, Leu271, Tyr285, Asp286, His290, Tyr293, Thr298, G1u299, Trp305, Ala310, Met314, Val380, Asn383.
10. A mutant glucose isomerase according to Claim l, wherein the wildtype enzyme is obtained from Actinoplanes missouriensis and wherein said amino acid substitution is at at least one of the following amino acid positions shown in sequence Ami in Figure 2, or at a corresponding position in an homologous glucose isomerase, replaced by an amino acid not found in the wildtype enzyme:
Ala25, Gly47, Tyr49, Thr52, Phe61, Ile85, Thr95, Gln122, Thr133, Tyr145, Tyr158, Gly189, Ile191, Gln204, Thr218, Gln222, Leu226, Thr229, Gly231, Leu236, Gln256, Leu258, Tyr293 and Val380.
11. A mutant glucose isomerase according to Claim 6, characterized in that said mutant differs from said wildtype by containing at least one of the following amino acid substitutions at the positions shown in the sequence Ami in Figure 2, or at a corresponding position in an homologous glucose isomerase:
R23Q, A25K, D57N, H54N, F61K, F94R, T95D, E186D, E186Q, Q204K, K253R, F254K, D255N, L258K, H29ON, K294R, K294Q.
12. A method for altering the pH-activity profile of glucose isomerase, comprising the substitution of at least one amino acid by an amino acid having a differently charged side chain wherein the substitution is of an amino acid within a sphere of 15 .ANG. around a metal ion coordination site.
13. The method according to Claim 12 wherein the substitution is to a more positively charged amino acid.
14. The method according to Claim 12 wherein the substitution is to a more negatively charged amino acid.
15. A process for obtaining a mutant glucose isomerase molecule according to any one of Claims 1-11 comprising the following steps:
a) obtaining a DNA sequence encoding a glucose isomerase, b) mutating this sequence at selected nucleotide positions, c) cloning the mutated sequence into an expression vector in such a way that the DNA sequence can be expressed, d) transforming a host organism or cell with said vector, e) culturing said host organism, f) isolating the glucose isomerase.
16. Use of a mutant glucose isomerase according to any one of claims 1-11 in the conversion of sugar.
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JPH06319543A (en) 1994-11-22
EP0436502B1 (en) 2005-11-16
PT96416A (en) 1991-10-15
FI910024A (en) 1991-07-05
CA2033658A1 (en) 1991-07-05
AU642688B2 (en) 1993-10-28
HUT61328A (en) 1992-12-28
US5384257A (en) 1995-01-24
BR9100025A (en) 1991-10-22
HU910016D0 (en) 1991-08-28
ES2253733T3 (en) 2006-06-01
EP0436502A3 (en) 1992-03-18
IE910011A1 (en) 1991-07-17
BG60869B1 (en) 1996-05-31
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DE69133491T2 (en) 2006-07-27
FI102542B (en) 1998-12-31
FI102542B1 (en) 1998-12-31
AU6865291A (en) 1991-07-11
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US5340738A (en) 1994-08-23

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