CA2251604A1 - Human hematopoietic stem and progenitor cell antigen and methods for its use - Google Patents

Human hematopoietic stem and progenitor cell antigen and methods for its use

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Publication number
CA2251604A1
CA2251604A1 CA002251604A CA2251604A CA2251604A1 CA 2251604 A1 CA2251604 A1 CA 2251604A1 CA 002251604 A CA002251604 A CA 002251604A CA 2251604 A CA2251604 A CA 2251604A CA 2251604 A1 CA2251604 A1 CA 2251604A1
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Prior art keywords
antigen
sequence
reagent
ligand
polypeptide
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Granted
Application number
CA002251604A
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French (fr)
Other versions
CA2251604C (en
Inventor
Sheri Miraglia
Wayne G. Godfry
Amy Yin
David Buck
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Miltenyi Biotec GmbH
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Individual
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Priority claimed from US08/639,891 external-priority patent/US5843633A/en
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Publication of CA2251604A1 publication Critical patent/CA2251604A1/en
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Publication of CA2251604C publication Critical patent/CA2251604C/en
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Expired - Lifetime legal-status Critical Current

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/705Receptors; Cell surface antigens; Cell surface determinants
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • A61P35/02Antineoplastic agents specific for leukemia
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P7/00Drugs for disorders of the blood or the extracellular fluid
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/569Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
    • G01N33/56966Animal cells
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10STECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10S530/00Chemistry: natural resins or derivatives; peptides or proteins; lignins or reaction products thereof
    • Y10S530/806Antigenic peptides or proteins
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10STECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10S530/00Chemistry: natural resins or derivatives; peptides or proteins; lignins or reaction products thereof
    • Y10S530/827Proteins from mammals or birds
    • Y10S530/838Marrow; spleen

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  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Immunology (AREA)
  • Organic Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Molecular Biology (AREA)
  • Engineering & Computer Science (AREA)
  • Cell Biology (AREA)
  • Hematology (AREA)
  • Biochemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biomedical Technology (AREA)
  • Urology & Nephrology (AREA)
  • Zoology (AREA)
  • Genetics & Genomics (AREA)
  • Biophysics (AREA)
  • Animal Behavior & Ethology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Veterinary Medicine (AREA)
  • Public Health (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Virology (AREA)
  • Pathology (AREA)
  • Toxicology (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Food Science & Technology (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • General Physics & Mathematics (AREA)
  • Oncology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Diabetes (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)

Abstract

A hematopoietic progenitor cell antigen and reagents, notably antibodies, that specifically bind to the antigen are provided. Expression of the antigen is highly tissue specific. It is only detected on a subset of hematopoietic progenitor cells derived from human bone marrow, fetal bone marrow and liver, cord blood and adult peripheral blood. The subset of cells recognized by AC133 is CD34bright and contains substantially all of the CFU-GM activity present in the CD34+ population. This highly specific distribution of AC133 makes it exceptionally useful as a reagent for isolating and characterizing human hematopoietic progenitor and stem cells. Cells selected for expression of AC133 antigen can be further purified by selection for other hematopoietic stem cell and progenitor cell markers.

Claims (47)

1. An antibody that specifically binds to AC133 antigen, of which antigen the amino acid sequence is shown in SEQ ID NO:2.
2. An antibody according to claim 1, wherein said antibody is a monoclonal antibody produced by a hybridoma cell line.
3. A monoclonal antibody according to claim 1, wherein said antibody is induced through contralateral immunization.
4. A method for enrichment of hematopoietic stem or progenitor cells or both, said method comprising:
combining a mixed population of human cells comprising hematopoietic stem or progenitor cells or both with a reagent that specifically binds to AC133 antigen, of which antigen the amino acid sequence is shown in SEQ ID NO:2; and selecting for those cells that bind said reagent;
wherein said selected cells are enriched in hematopoietic stem or progenitor cell activity or both, depending on whether said mixed population of human cells contained hematopoietic stem or progenitor cells or both, respectively.
5. A method according to claim 4, further comprising:
combining said mixed population of human cells with a reagent that specifically recognize at least one of the cell surface markers CD90, CD117 and HLA-DR; and selecting for those cells that are positive for said at least one of said cell surface markers.
6. A method according to claim 4, wherein said reagent is an antibody or an antibody mixture.
7. A method according to claim 6, wherein at least one of said antibodies is fluorochrome conjugated.
8. A method according to claim 7, wherein said selecting with said fluorochrome conjugated antibodies is by flow cytometry.
9. A method according to claim 6, wherein at least one of said antibodies is conjugated to magnetic particles.
10. A method according to claim 9, wherein said selecting with said magnetic particle conjugated antibodies is by high gradient magnetic selection.
11. A substantially pure population of hematopoietic progenitor cells, wherein said cells are bound to a reagent that specifically binds to AC133 antigen, of which antigen the amino acid sequence is shown in SEQ ID NO:2.
12. A substantially pure population of hematopoietic progenitor cells according to claim 11, wherein said reagent is a monoclonal antibody.
13. A substantially pure population of hematopoietic progenitor cells according to claim 11, wherein said progenitor cells are obtained from human fetal liver.
14. A substantially pure population of hematopoietic progenitor cells according to claim 11, wherein said progenitor cells are obtained from human peripheral blood.
15. A substantially pure population of hematopoietic progenitor cells according to claim 11, wherein said progenitor cells are obtained from human bone marrow.
16. A substantially pure population of hematopoietic progenitor cells according to claim 15, wherein said bone marrow is adult.
17. A substantially pure population of hematopoietic progenitor cells according to claim 15, wherein said bone marrow is fetal.
18. An isolated nucleic acid molecule which comprises a sequence having an amino acid coding region for AC133 as set forth in Figure 12 (SEQ ID NO: 1), with the proviso that if said molecule is an RNA molecule, U replaces T in said sequence of said molecule.
19. An isolated nucleic acid molecule which comprises a sequence which is at least 90% identical to the amino acid coding region for AC133 as set forth in Figure 12 (SEQ ID NO:
1), with the proviso that if said molecule is an RNA molecule, U replaces T in said sequence of said molecule.
20. An isolated nucleic acid molecule which comprises a sequence which is a subsequence of the amino acid coding region for AC133 as set forth in Figure 12 (SEQ ID NO: 1) and is at least 14 nucleotides in length, with the proviso that (i) if said molecule is an RNA molecule, U replaces T in said sequence of said molecule, and (ii) said sequence is not nucleotides 347-667, 1564-1696, or 2010-2386 of SEQ ID NO: 1.
21. An isolated nucleic acid molecule which comprises a sequence complementary to said sequence of a molecule according to any of claims 18 to 20.
22. An isolated nucleic acid molecule which consists essentially of DNA encoding the amino acid sequence of AC133 shown in SEQ ID NO: 2.
23. An expression vector comprising a nucleic acid sequence of claim 18.
24. A cell transfected with the molecule of claim 23.
25. An isolated polypeptide, wherein said polypeptide comprises: (1) a first amino acid sequence of AC133 as set forth in SEQ ID NO:2; (2) a second amino acid sequence wherein said second sequence is a subsequence of said first sequence and is at least 6 amino acids in length; or (3) a third sequence in which at least one amino acid of said first or second sequences is replaced by a different amino acid, with the proviso that said amino acid replacement is a replacement of one acidic residue for another, one basic residue for another, one non-polar residue for another, one uncharged polar residue for another, or one aromatic residue for another, with the proviso that said third sequence is at least 90% identical to said first or second sequence.
26. The isolated polypeptide of claim 25, wherein said polypeptide comprises said first sequence.
27. The isolated polypeptide of claim 25, wherein said polypeptide comprises said second sequence.
28. The isolated polypeptide of claim 25, wherein said polypeptide comprises said third sequence.
29. The polypeptide of claim 25 complexed to a ligand.
30. The polypeptide complex of claim 29, wherein said ligand is an antibody.
31. An isolated polypeptide, wherein said polypeptide comprises the amino acid sequence from extracellular N-terminus, aa 20-107; first transmembrane region, aa 107-126;
first cytoplasmic loop, aa 127-157; second transmembrane region, aa 158-179; first extracellular loop, aa 180-435;
third transmembrane region, aa 436-454; second cytoplasmic loop, aa 455-480; fourth transmembrane region, aa 481-503;
second extracellular loop, aa 504-792; fifth transmembrane, aa 793-816; or cytoplasmic C-terminus, aa 817-865; of SEQ ID
NO:2.
32. A method for identifying a ligand that binds to human hematopoietic stem cells, comprising detecting binding of said ligand with the polypeptide of claim 25.
33. A reagent that specifically binds to the polypeptide of claim 25.
34. The reagent of claim 33, wherein said reagent is selected from the group consisting of monoclonal and polyclonal antibodies.
35. The reagent of claim 33, wherein said reagent is a physiological or synthetic ligand.
36. The polypeptide of claim 25, wherein said polypeptide is not glycosolated.
37. The polypeptide of claim 25, wherein said polypeptide is glycosolated.
38. In a method of isolating hematopoietic stem cells using a cell separation technique based on identification of stem cells by selective binding of a ligand to an antigenic marker on said stem cell, an improvement which comprises:
utilizing as said antigenic marker AC133 antigen, of which antigen the amino acid sequence is shown in SEQ ID NO:2.
39. The method of claim 38, wherein said ligand is an antibody.
40. The method of claim 38, wherein said ligand binds to an extracellular region of said AC133 antigen.
41. The method of claim 38, wherein said ligand binds to extracellular N-terminus, aa 20-107; first extracellular loop, aa 180-435; or second extracellular loop, aa 504-792; of SEQ
ID NO:2.
42. The method of claim 38, wherein said ligand has been identified by determining whether compounds in a group of est compounds bind to said AC133 antigen and selecting said ligand from among compounds that bind specifically to said AC133 antigen with less than 10% crossreactivity with any antigen present on mature blood cells.
43. The method of claim 38, wherein crossreactivity is measured by a competitive binding assay between pure AC133 antigen, said ligand, and said suspected crossreactive antigen using concentrations of AC133 antigen and said ligand where said ligand half-saturates binding to AC133.
44. A ligand for AC133 identified by the method of claim 32.
45. A reagent that binds specifically to AC133 antigen, of which antigen the amino acid sequence is shown in SEQ ID NO:2, with less than 5% crossreactivity with any antigen present on mature blood cells.
46. The reagent of claim 45, wherein said reagent is attached to a surface or to a detectible label.
47. The reagent of claim 45, wherein said label is a fluorescent label.
CA2251604A 1996-04-26 1997-04-25 Human hematopoietic stem and progenitor cell antigen and methods for its use Expired - Lifetime CA2251604C (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US08/639,891 US5843633A (en) 1996-04-26 1996-04-26 Characterization of a human hematopoietic progenitor cell antigen
US08/639,891 1996-04-26
US08/842,382 US6455678B1 (en) 1996-04-26 1997-04-23 Human hematopoietic stem and progenitor cell antigen
US08/842,382 1997-04-23
PCT/US1997/006930 WO1997041224A1 (en) 1996-04-26 1997-04-25 Human hematopoietic stem and progenitor cell antigen and methods for its use

Publications (2)

Publication Number Publication Date
CA2251604A1 true CA2251604A1 (en) 1997-11-06
CA2251604C CA2251604C (en) 2012-05-29

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CA2251604A Expired - Lifetime CA2251604C (en) 1996-04-26 1997-04-25 Human hematopoietic stem and progenitor cell antigen and methods for its use

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US (4) US6455678B1 (en)
EP (1) EP0953046B1 (en)
JP (3) JP3908279B2 (en)
AT (1) ATE435282T1 (en)
AU (1) AU720938B2 (en)
CA (1) CA2251604C (en)
DE (1) DE69739480D1 (en)
DK (1) DK0953046T3 (en)
ES (1) ES2327691T3 (en)
WO (1) WO1997041224A1 (en)

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Publication number Priority date Publication date Assignee Title
CN111560053A (en) * 2020-06-17 2020-08-21 清华大学深圳国际研究生院 CD133 antagonistic polypeptide, derivative and application thereof
CN111560053B (en) * 2020-06-17 2022-05-27 清华大学深圳国际研究生院 CD133 antagonistic polypeptide, derivative and application thereof

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ES2327691T3 (en) 2009-11-02
JP2000509277A (en) 2000-07-25
JP2006246898A (en) 2006-09-21
AU2682197A (en) 1997-11-19
DK0953046T3 (en) 2009-08-10
US20090093052A1 (en) 2009-04-09
AU720938B2 (en) 2000-06-15
US6455678B1 (en) 2002-09-24
US20010051372A1 (en) 2001-12-13
EP0953046A1 (en) 1999-11-03
US20050214861A1 (en) 2005-09-29
EP0953046B1 (en) 2009-07-01
CA2251604C (en) 2012-05-29
ATE435282T1 (en) 2009-07-15
WO1997041224A1 (en) 1997-11-06
JP3908279B2 (en) 2007-04-25
DE69739480D1 (en) 2009-08-13
US8084033B2 (en) 2011-12-27
JP2006149396A (en) 2006-06-15

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