CA2341143A1 - Production of motif-specific and context-independent antibodies using peptide libraries as antigens - Google Patents

Production of motif-specific and context-independent antibodies using peptide libraries as antigens Download PDF

Info

Publication number
CA2341143A1
CA2341143A1 CA002341143A CA2341143A CA2341143A1 CA 2341143 A1 CA2341143 A1 CA 2341143A1 CA 002341143 A CA002341143 A CA 002341143A CA 2341143 A CA2341143 A CA 2341143A CA 2341143 A1 CA2341143 A1 CA 2341143A1
Authority
CA
Canada
Prior art keywords
context
specific
motif
amino acid
recognition sites
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
CA002341143A
Other languages
French (fr)
Other versions
CA2341143C (en
Inventor
Yi Tan
Michael J. Comb
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Cell Signaling Technology Inc
Original Assignee
Cell Signaling Technology
Yi Tan
Michael J. Comb
New England Biolabs, Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Cell Signaling Technology, Yi Tan, Michael J. Comb, New England Biolabs, Inc. filed Critical Cell Signaling Technology
Publication of CA2341143A1 publication Critical patent/CA2341143A1/en
Application granted granted Critical
Publication of CA2341143C publication Critical patent/CA2341143C/en
Anticipated expiration legal-status Critical
Expired - Lifetime legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/44Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material not provided for elsewhere, e.g. haptens, metals, DNA, RNA, amino acids

Abstract

A method is provided for producing motif-specific, context-independent antibodies which are specific to at least one fixed amino acid residue whether modified or unmodified, in the context of variable surrounding amino acid or peptide sequences. The method includes the steps of (1) constructing a peptide library featuring at least one fixed amino acid and variable surrounding amino acids, and (2) immunizing a host with this peptide library. Antibodies may optionally be isolated and purified from the antisera of this immunized host. The disclosed method encompasses both modified motifs, such as phosphothreonine, phosphoserine, MAPK consensus recognition sites, 14-3-3 consensus recognition sites, CDK consensus recognition sites, and acetylated-lysine, as well as unmodified motifs.
CA002341143A 1998-09-04 1999-08-26 Production of motif-specific and context-independent antibodies using peptide libraries as antigens Expired - Lifetime CA2341143C (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US09/148,712 US6441140B1 (en) 1998-09-04 1998-09-04 Production of motif-specific and context-independent antibodies using peptide libraries as antigens
US09/148,712 1998-09-04
PCT/US1999/019597 WO2000014536A1 (en) 1998-09-04 1999-08-26 Production of motif-specific and context-independent antibodies using peptide libraries as antigens

Publications (2)

Publication Number Publication Date
CA2341143A1 true CA2341143A1 (en) 2000-03-16
CA2341143C CA2341143C (en) 2006-11-21

Family

ID=22527002

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002341143A Expired - Lifetime CA2341143C (en) 1998-09-04 1999-08-26 Production of motif-specific and context-independent antibodies using peptide libraries as antigens

Country Status (6)

Country Link
US (5) US6441140B1 (en)
EP (3) EP1110086B1 (en)
JP (5) JP3732408B2 (en)
CA (1) CA2341143C (en)
DE (1) DE69936389T2 (en)
WO (1) WO2000014536A1 (en)

Families Citing this family (72)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6884597B1 (en) * 1998-01-20 2005-04-26 Medical & Biological Laboratories, Co., Ltd. Method for detecting acetyltransferase and deacetylase activities and method for screening inhibitors or enhancers of these enzymes
US9085609B2 (en) * 1998-09-04 2015-07-21 Cell Signaling Technology, Inc. Production of motif-specific and context-independent antibodies using peptide libraries as antigens
US7300753B2 (en) * 1998-09-04 2007-11-27 John Rush Immunoaffinity isolation of modified peptides from complex mixtures
US6441140B1 (en) * 1998-09-04 2002-08-27 Cell Signaling Technology, Inc. Production of motif-specific and context-independent antibodies using peptide libraries as antigens
US20120244594A9 (en) 1998-09-04 2012-09-27 Cell Signaling Technology, Inc. Immunoaffinity isolation of modified peptides from complex mixtures
US7198896B2 (en) * 1998-09-04 2007-04-03 Cell Signaling Technology, Inc. Immunoaffinity isolation of modified peptides from complex mixtures
US7208581B1 (en) * 1999-11-05 2007-04-24 The Burnham Institute TRAF family proteins
WO2001049709A1 (en) * 2000-01-03 2001-07-12 Ramot University Authority For Applied Research & Industrial Development Ltd. Glycogen synthase kinase-3 inhibitors
CA2407945A1 (en) * 2000-05-04 2001-11-08 Mount Sinai Hospital Molecules that modulate ubiquitin-dependent proteolysis and methods for identifying same
US20020102248A1 (en) * 2000-09-06 2002-08-01 The Government Of The United States Of America Modulating response to genotoxic stress
EP1304561A4 (en) * 2001-03-23 2006-01-11 Japan Science & Tech Agency Probe for visualizing phosphorylation/dephosphorylation of protein and method of detecting and quantifying phosphorylation/dephosphorylation of protein
CA2454605C (en) 2001-06-21 2006-11-07 Cell Signaling Technology, Inc. Immunoaffinity isolation of modified peptides from complex mixtures
US20110111424A1 (en) * 2001-06-21 2011-05-12 Cell Signaling Technology, Inc. Analysis of ubiquitinated polypeptides
US7378432B2 (en) 2001-09-14 2008-05-27 Tel Aviv University Future Technology Development L.P. Glycogen synthase kinase-3 inhibitors
US7166441B2 (en) * 2002-03-12 2007-01-23 Perseptive Biosystems Inc. Method and apparatus for the identification and quantification of biomolecules
GB0208104D0 (en) * 2002-04-09 2002-05-22 Univ Dundee Method
EP1569956B1 (en) 2002-12-12 2014-02-26 Tel Aviv University Future Technology Development L.P. Glycogen synthase kinase-3 inhibitors
CN1838954B (en) * 2003-06-27 2013-01-16 特拉维夫大学未来科技开发有限公司 Glycogen synthase kinase-3 inhibitors
WO2005019831A2 (en) * 2003-08-18 2005-03-03 Tethys Bioscience, Inc. Methods for reducing complexity of a sample using small epitope antibodies
EP1668369B1 (en) * 2003-08-20 2016-01-06 ProMIS Neurosciences Inc. Epitope protection assay and method for detecting protein conformations
US20050064507A1 (en) * 2003-09-11 2005-03-24 James Stephen Shaw Determining kinase specificity
WO2005050206A2 (en) * 2003-09-17 2005-06-02 Molecular Probes, Inc. Competitive immunoassay
US20050244905A1 (en) * 2004-04-29 2005-11-03 Harry Ischiropoulos Nitrated fibrinogen as a marker for coronary artery disease and rapid blood clot formation
US8852879B2 (en) 2004-04-29 2014-10-07 The Children's Hospital Of Philadelphia Materials and methods for the detection of nitrated fibrinogen
US7973134B2 (en) * 2004-07-07 2011-07-05 Cell Signaling Technology, Inc. Reagents for the detection of protein phosphorylation in anaplastic large cell lymphoma signaling pathways
US20070048797A1 (en) * 2004-08-11 2007-03-01 Xing Su Composite organic inorganic nanoclusters as carriers and identifiers of tester molecules
US7935790B2 (en) * 2004-10-04 2011-05-03 Cell Singaling Technology, Inc. Reagents for the detection of protein phosphorylation in T-cell receptor signaling pathways
US20070224662A1 (en) * 2004-12-17 2007-09-27 Jun Luo Post-translational modification of proteins in cell-free expression systems
US7807789B2 (en) * 2004-12-21 2010-10-05 Cell Signaling Technology, Inc. Reagents for the detection of protein phosphorylation in EGFR-signaling pathways
WO2006106957A1 (en) * 2005-04-01 2006-10-12 National University Corporation Hokkaido University Monoclonal antibody specifically recognizing modification site after translation of p53 and kit for assaying modification site containing the same
US20090099340A1 (en) * 2007-10-12 2009-04-16 Cell Signaling Technology, Inc. Reagents for the detection of protein phosphorylation in carcinoma signaling pathways
WO2006117007A1 (en) * 2005-05-03 2006-11-09 The Antibody Project Aps Methods for obtaining antigen specific antibodies
EP1907837A1 (en) * 2005-06-24 2008-04-09 Beckman Coulter, Inc. Immunoassay of phosphorylated proteins
US7906297B2 (en) 2005-07-20 2011-03-15 Cell Signaling Technology, Inc. Reagents for the detection of phosphorylated ATR kinase (Ser 428) and uses thereof
US20100151495A9 (en) * 2005-08-31 2010-06-17 Cell Signaling Technolgy, Inc. Reagents for the detection of protein phosphorylation in carcinoma signaling pathways
EP1934867A2 (en) * 2005-08-31 2008-06-25 Cell Signaling Technology, Inc. Reagents for the detection of protein phosphorylation in leukemia signaling pathways
US8859209B2 (en) 2006-01-12 2014-10-14 Carviar Aps Reimmunization and antibody design
US8097425B2 (en) * 2006-03-10 2012-01-17 Tethys Bioscience, Inc. Multiplex protein fractionation
WO2007127335A2 (en) * 2006-04-27 2007-11-08 Cell Signaling Technology, Inc. Reagents for the detection of protein phosphorylation in atm and atr kinase signaling pathways
PL2027158T3 (en) 2006-05-02 2013-02-28 Carviar Aps Method for immunizing an avian species
WO2007133689A2 (en) * 2006-05-12 2007-11-22 Cell Signaling Technology, Inc. Reagents for the detection of protein acetylation signaling pathways
US20150232540A1 (en) 2006-07-11 2015-08-20 Cell Signaling Technology, Inc. Analysis of ubiquitnated polypeptides
US7939636B2 (en) * 2006-08-11 2011-05-10 Cell Signaling Technology, Inc. Reagents for the detection of protein phosphorylation in c-Src signaling pathways
US20100092992A1 (en) * 2006-08-17 2010-04-15 Peter Hornbeck Lysine acetylation sites
US20090258442A1 (en) * 2006-08-31 2009-10-15 Cell Signaling Technology, Inc. Reagents for the detection of protein phosphorylation in carcinoma signaling pathways
US20090068684A1 (en) * 2007-03-26 2009-03-12 Cell Signaling Technology, Inc. Serine and threoninephosphorylation sites
US20080238709A1 (en) * 2007-03-28 2008-10-02 Faramarz Vaziri One-way communication apparatus with dynamic key generation
US7977462B2 (en) 2007-04-19 2011-07-12 Cell Signaling Technology, Inc. Tyrosine phosphorylation sites
JP5564431B2 (en) 2007-10-29 2014-07-30 エーザイ・アール・アンド・ディー・マネジメント株式会社 Methods for predicting the ability of zearalenone analog compounds to treat cancer
US20090220991A1 (en) * 2008-02-29 2009-09-03 Cell Signaling Technology, Inc. Reagents for the detection of protein phosphorylation in leukemia signaling pathways
EP2304439A4 (en) * 2008-05-29 2012-07-04 Nuclea Biotechnologies Llc Anti-phospho-akt antibodies
US9868781B2 (en) * 2008-06-02 2018-01-16 Cornell University Antibodies for ubiquitinated proteins
US7933146B2 (en) * 2008-10-08 2011-04-26 Seagate Technology Llc Electronic devices utilizing spin torque transfer to flip magnetic orientation
WO2010051215A1 (en) * 2008-10-31 2010-05-06 Proteonova, Inc. Methods for making hiv vaccines and related compositions
US8771693B2 (en) * 2009-10-27 2014-07-08 Beth Israel Deaconess Medical Center, Inc. Methods and compositions for the generation and use of conformation-specific antibodies
US9453845B2 (en) 2010-02-01 2016-09-27 Cell Signaling Technology, Inc. Mass spectroscopy analysis of mutant polypeptides in biological samples
US20110245100A1 (en) * 2010-04-02 2011-10-06 Kalobios Pharmaceuticals, Inc. Generation of antibodies to an epitope of interest
FI20105715A0 (en) * 2010-06-18 2010-06-18 Helsingin Yliopisto A polyclonal antibody that binds to acetylated HMGB1
WO2012061732A1 (en) 2010-11-05 2012-05-10 Cell Signaling Technology, Inc. Motif-specific and context-independent antibodies to a cleaved caspase motif or a sumoylated lysine-containing motif
US10487114B2 (en) 2011-04-27 2019-11-26 Beth Israel Deaconess Medical Center, Inc. Methods for administering peptides for the generation of effective c/s conformation-specific antibodies to a human subject in need thereof
CN104039350B (en) * 2011-09-17 2019-07-05 源道隆(苏州)医学科技有限公司 The induction of polypeptide epitope and its associated antibodies that any three or more amino acid residues are constituted
EP2573565A1 (en) 2011-09-23 2013-03-27 Gerhard Matthias Kresbach Immune detection method for common epitopes of two or more analytes in samples of complex compositions, device, and kit for enabling said immune detection method
WO2013125221A1 (en) * 2012-02-21 2013-08-29 静岡県 Affinity ligand for antibody purification
JP6293409B2 (en) * 2012-10-04 2018-03-14 国立大学法人富山大学 Rapid identification method of antigen-specific rabbit antibody-producing cells and use thereof
EP2968548B1 (en) 2013-03-15 2020-09-09 Beth Israel Deaconess Medical Center, Inc. Methods and compositions for the generation and use of conformation-specific antibodies
WO2015157530A2 (en) * 2014-04-09 2015-10-15 Brandeis University Enzymatically responsive magnetic particles and their use
CA2945263A1 (en) 2014-04-09 2015-10-15 Christopher Rudd Use of gsk-3 inhibitors or activators which modulate pd-1 or t-bet expression to modulate t cell immunity
EP3137482A1 (en) 2014-05-02 2017-03-08 MorphoSys AG Peptide libraries
US20210011025A1 (en) 2015-11-11 2021-01-14 Serimmune Inc. Methods and compositions for assessing antibody specificities
CA3071894A1 (en) * 2017-08-04 2019-02-07 Abcam Plc Methods and compositions for the development of antibodies specific to epitope post-translational modification status
GB202012722D0 (en) * 2020-08-14 2020-09-30 Abcam Plc Validation method
CN116444677A (en) * 2023-06-09 2023-07-18 中国人民解放军军事科学院军事医学研究院 FoxM1 protein Y575 phosphorylated polyclonal antibody, preparation method and application thereof

Family Cites Families (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JPS61227596A (en) * 1985-04-01 1986-10-09 Fujisawa Pharmaceut Co Ltd Antiphosphorylated tyrosine monoclonal antibody and hybridoma producing same
EP0544942A1 (en) * 1991-12-06 1993-06-09 Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V. Novel tools for the diagnosis and treatment of Alzheimer disease
JPH05244987A (en) * 1992-02-28 1993-09-24 Unitika Ltd Anti-sulfated tyrosine antibody, its production and hybridoma capable of producing anti-sulfated tyrosine monoclonal antibody
US5532167A (en) * 1994-01-07 1996-07-02 Beth Israel Hospital Substrate specificity of protein kinases
US5679769A (en) * 1994-03-15 1997-10-21 Sloan-Kettering Institute For Cancer Research Synthesis of asparagine-linked glycopeptides on a polymeric solid support
CA2172771A1 (en) * 1995-03-28 1996-09-29 Akiyoshi Tani Method for assaying map kinase
US5759787A (en) * 1996-08-26 1998-06-02 Tularik Inc. Kinase assay
FR2757864B1 (en) 1996-12-30 1999-03-19 Centre Nat Rech Scient ANTIBODIES SPECIFICALLY RECOGNIZING A NITROSYLATED PROTEIN, THEIR PREPARATION METHOD, THEIR THERAPEUTIC AND DIAGNOSTIC USE
US5965352A (en) * 1998-05-08 1999-10-12 Rosetta Inpharmatics, Inc. Methods for identifying pathways of drug action
US6441140B1 (en) * 1998-09-04 2002-08-27 Cell Signaling Technology, Inc. Production of motif-specific and context-independent antibodies using peptide libraries as antigens
US9919577B2 (en) 2014-11-14 2018-03-20 Hyundai Motor Company Air-conditioning device for vehicle

Also Published As

Publication number Publication date
DE69936389T2 (en) 2008-02-28
JP2006036784A (en) 2006-02-09
WO2000014536A1 (en) 2000-03-16
EP2325204A2 (en) 2011-05-25
EP1110086B1 (en) 2007-06-27
EP1850131A1 (en) 2007-10-31
US7344714B2 (en) 2008-03-18
DE69936389D1 (en) 2007-08-09
US6982318B1 (en) 2006-01-03
EP2325204B1 (en) 2014-08-13
US20020132988A1 (en) 2002-09-19
EP1110086A1 (en) 2001-06-27
JP3732408B2 (en) 2006-01-05
US7259022B2 (en) 2007-08-21
JP2002524092A (en) 2002-08-06
US20020168684A1 (en) 2002-11-14
JP2016210783A (en) 2016-12-15
US6441140B1 (en) 2002-08-27
EP1110086A4 (en) 2003-08-27
CA2341143C (en) 2006-11-21
JP5648007B2 (en) 2015-01-07
US20030068652A1 (en) 2003-04-10
JP5013693B2 (en) 2012-08-29
JP2014132019A (en) 2014-07-17
EP2325204A3 (en) 2011-10-26
JP2012162535A (en) 2012-08-30
EP1850131B1 (en) 2013-01-23

Similar Documents

Publication Publication Date Title
CA2341143A1 (en) Production of motif-specific and context-independent antibodies using peptide libraries as antigens
WO2001083559A3 (en) Production and use of protein variants having modified immunogenecity
WO2000026230A8 (en) Low allergenic protein variants
HUP0301723A2 (en) Process for producing peptides by using <i>in vitro</i>transcription/translation system
JP2006036784A5 (en)
Senn et al. 15 N-labeled P22 c2 repressor for nuclear magnetic resonance studies of protein-DNA interactions
WO2001047956A3 (en) Method for obtaining proteins having improved functional characteristics
Sledge et al. Antibody structure: amino terminal sequences of nurse shark light and heavy chains
AU2003230999A8 (en) Fatty alcohol oxidase genes and proteins from candida troplicalis and methods relating thereto
WO2003018797A3 (en) Method and device for integrated protein expression, purification and detection
CN105273060A (en) Antibody with lysine single methylated derivatization modification and preparation method thereof
WO2003025567A3 (en) Production of support-bonded molecules by means of oligonucleotide tags
CA2025350A1 (en) Process for production of c-terminal .alpha.-amidated peptide
WO2002007740A3 (en) Snake toxin and use thereof as a pharmaceutical
WO2000028033A3 (en) Nucleic acids and polypeptides having altered expression in the t84 gut barrier model
WO1997012900A3 (en) Ring finger protein
WO2002062730A3 (en) Thermodynamic propensities of amino acids in the native state ensemble: implications for fold recognition
WO2002083853A3 (en) Method for enhancing the translation and expression of recombinant proteins
Baudyš et al. Characterization of the sulfated glycopeptide of chicken pepsinogen
AU2003242344A1 (en) Translation templates and library thereof, proteins synthesized therefrom and protein library, constituents thereof, process for producing the same and method of using the same
WO2002094855A3 (en) Peptide synthesis method
WO2003031981A3 (en) Kit for predicting binding of a specific antibody to a potential immunogen and method of screening
JP2000037187A5 (en)
CA2594178A1 (en) Methods of production of modified proteins
ATE319821T1 (en) METHOD AND PRODUCT FOR REGULATING THE RESPONSE OF CELLS TO EXTERNAL SIGNALS

Legal Events

Date Code Title Description
EEER Examination request
MKEX Expiry

Effective date: 20190826