WO2001002846A8 - System and method for molecular sample measurement - Google Patents

System and method for molecular sample measurement

Info

Publication number
WO2001002846A8
WO2001002846A8 PCT/US2000/017919 US0017919W WO0102846A8 WO 2001002846 A8 WO2001002846 A8 WO 2001002846A8 US 0017919 W US0017919 W US 0017919W WO 0102846 A8 WO0102846 A8 WO 0102846A8
Authority
WO
WIPO (PCT)
Prior art keywords
lasers
sample measurement
molecular sample
channel
system provides
Prior art date
Application number
PCT/US2000/017919
Other languages
French (fr)
Other versions
WO2001002846A1 (en
WO2001002846A9 (en
Inventor
Paul Melman
Marvin Tabasky
Original Assignee
Corning Applied Technologies I
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Corning Applied Technologies I filed Critical Corning Applied Technologies I
Priority to AU57780/00A priority Critical patent/AU5778000A/en
Publication of WO2001002846A1 publication Critical patent/WO2001002846A1/en
Publication of WO2001002846A8 publication Critical patent/WO2001002846A8/en
Publication of WO2001002846A9 publication Critical patent/WO2001002846A9/en

Links

Classifications

    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B6/00Light guides; Structural details of arrangements comprising light guides and other optical elements, e.g. couplings
    • G02B6/24Coupling light guides
    • G02B6/36Mechanical coupling means
    • G02B6/3628Mechanical coupling means for mounting fibres to supporting carriers
    • G02B6/3632Mechanical coupling means for mounting fibres to supporting carriers characterised by the cross-sectional shape of the mechanical coupling means
    • G02B6/3636Mechanical coupling means for mounting fibres to supporting carriers characterised by the cross-sectional shape of the mechanical coupling means the mechanical coupling means being grooves
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N27/00Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
    • G01N27/26Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating electrochemical variables; by using electrolysis or electrophoresis
    • G01N27/416Systems
    • G01N27/447Systems using electrophoresis
    • G01N27/44704Details; Accessories
    • G01N27/44717Arrangements for investigating the separated zones, e.g. localising zones
    • G01N27/44721Arrangements for investigating the separated zones, e.g. localising zones by optical means
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N27/00Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
    • G01N27/26Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating electrochemical variables; by using electrolysis or electrophoresis
    • G01N27/416Systems
    • G01N27/447Systems using electrophoresis
    • G01N27/44756Apparatus specially adapted therefor
    • G01N27/44782Apparatus specially adapted therefor of a plurality of samples
    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B6/00Light guides; Structural details of arrangements comprising light guides and other optical elements, e.g. couplings
    • G02B6/24Coupling light guides
    • G02B6/36Mechanical coupling means
    • G02B6/3628Mechanical coupling means for mounting fibres to supporting carriers
    • G02B6/3648Supporting carriers of a microbench type, i.e. with micromachined additional mechanical structures
    • G02B6/3652Supporting carriers of a microbench type, i.e. with micromachined additional mechanical structures the additional structures being prepositioning mounting areas, allowing only movement in one dimension, e.g. grooves, trenches or vias in the microbench surface, i.e. self aligning supporting carriers
    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B6/00Light guides; Structural details of arrangements comprising light guides and other optical elements, e.g. couplings
    • G02B6/24Coupling light guides
    • G02B6/36Mechanical coupling means
    • G02B6/3628Mechanical coupling means for mounting fibres to supporting carriers
    • G02B6/368Mechanical coupling means for mounting fibres to supporting carriers with pitch conversion between input and output plane, e.g. for increasing packing density
    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B6/00Light guides; Structural details of arrangements comprising light guides and other optical elements, e.g. couplings
    • G02B6/24Coupling light guides
    • G02B6/36Mechanical coupling means
    • G02B6/38Mechanical coupling means having fibre to fibre mating means
    • G02B6/3801Permanent connections, i.e. wherein fibres are kept aligned by mechanical means
    • G02B6/3803Adjustment or alignment devices for alignment prior to splicing
    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B6/00Light guides; Structural details of arrangements comprising light guides and other optical elements, e.g. couplings
    • G02B6/24Coupling light guides
    • G02B6/42Coupling light guides with opto-electronic elements
    • G02B6/4201Packages, e.g. shape, construction, internal or external details
    • G02B6/4249Packages, e.g. shape, construction, internal or external details comprising arrays of active devices and fibres
    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B6/00Light guides; Structural details of arrangements comprising light guides and other optical elements, e.g. couplings
    • G02B6/24Coupling light guides
    • G02B6/36Mechanical coupling means
    • G02B6/3628Mechanical coupling means for mounting fibres to supporting carriers
    • G02B6/3684Mechanical coupling means for mounting fibres to supporting carriers characterised by the manufacturing process of surface profiling of the supporting carrier
    • G02B6/3692Mechanical coupling means for mounting fibres to supporting carriers characterised by the manufacturing process of surface profiling of the supporting carrier with surface micromachining involving etching, e.g. wet or dry etching steps

Abstract

A system for aligning the optical components of a chemical analysis system in which capillaries or optical fibers are supported by a substrate. The system provides for alignment of elements of an electrophoresis system in an efficient high sampling rate capability. The system provides multiple sources, such as lasers or LEDs that are optically coupled to each capillary or channel. Multi-analyte capability, a variety of analysis modes and DNA sequencing operations are applications of systems using a plurality of lasers per channel.
PCT/US2000/017919 1999-07-01 2000-06-29 System and method for molecular sample measurement WO2001002846A1 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU57780/00A AU5778000A (en) 1999-07-01 2000-06-29 System and method for molecular sample measurement

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US09/345,904 1999-07-01
US09/345,904 US6445448B1 (en) 1997-03-12 1999-07-01 System and method for molecular sample measurement

Publications (3)

Publication Number Publication Date
WO2001002846A1 WO2001002846A1 (en) 2001-01-11
WO2001002846A8 true WO2001002846A8 (en) 2001-05-10
WO2001002846A9 WO2001002846A9 (en) 2002-07-25

Family

ID=23357024

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2000/017919 WO2001002846A1 (en) 1999-07-01 2000-06-29 System and method for molecular sample measurement

Country Status (3)

Country Link
US (2) US6445448B1 (en)
AU (1) AU5778000A (en)
WO (1) WO2001002846A1 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9281001B2 (en) 2004-11-08 2016-03-08 Phoseon Technology, Inc. Methods and systems relating to light sources for use in industrial processes

Families Citing this family (36)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6665060B1 (en) 1999-10-29 2003-12-16 Cytyc Corporation Cytological imaging system and method
US6580507B2 (en) * 2000-03-02 2003-06-17 Sd Acquisition Inc. Single source, single detector chip, multiple-longitudinal channel electromagnetic radiation absorbance and fluorescence monitoring system
WO2001084134A1 (en) * 2000-04-12 2001-11-08 Hitachi, Ltd. Capillary array unit and electrophoretic device comprising the same
JP2002131281A (en) * 2000-10-27 2002-05-09 Nippon Sheet Glass Co Ltd Gas capillary array for analyzing dna, and manufacturing method of the gas capillary array
CA2436136C (en) * 2001-01-26 2010-04-20 Biocal Technology, Inc. Multi-channel bio-separation cartridge
DE60220497T2 (en) * 2001-01-26 2008-01-31 Biocal Technology, Inc., Irvine OPTICAL DETECTION IN A MULTI-CHANNEL BIOSEPARATION SYSTEM
JP3897277B2 (en) * 2001-04-02 2007-03-22 株式会社日立製作所 Capillary array and capillary array photodetector
JP2004537053A (en) * 2001-07-25 2004-12-09 アプレラ コーポレイション Time delay integration in electrophoresis detection systems
WO2003034044A2 (en) * 2001-10-19 2003-04-24 Biocal Technology, Inc. Multi-color multiplexed analysis in a bio-separation system
US6870165B2 (en) 2001-10-19 2005-03-22 Biocal Technology, Inc. Multi-color multiplexed analysis in a bio-separation system
US6728596B1 (en) * 2001-11-28 2004-04-27 Therma-Wave, Inc. Wafer prealigner with phase sensitive detection
DE10200499A1 (en) * 2002-01-03 2003-07-10 Zeiss Carl Jena Gmbh Method and / or arrangement for the identification of fluorescent, luminescent and / or absorbent substances on and / or in sample carriers
WO2003062815A1 (en) * 2002-01-18 2003-07-31 Biocal Technology, Inc. Multi-segment cartridge for bio-separation with multiplexed fluorescence detection
US9943847B2 (en) 2002-04-17 2018-04-17 Cytonome/St, Llc Microfluidic system including a bubble valve for regulating fluid flow through a microchannel
TWI229946B (en) * 2002-05-08 2005-03-21 Phoseon Technology Inc High efficiency solid-state light source and methods of use and manufacture
US6894777B2 (en) * 2002-08-07 2005-05-17 Romaine R. Maiefski Multiple-channel UV spectrometer assembly
FR2858412B1 (en) * 2003-07-31 2007-03-30 Stephane Louis Frederi Perquis SYSTEM AND METHOD FOR MEASURING THE VISUAL ASPECT OF MATERIALS.
US7298478B2 (en) * 2003-08-14 2007-11-20 Cytonome, Inc. Optical detector for a particle sorting system
US7819550B2 (en) 2003-10-31 2010-10-26 Phoseon Technology, Inc. Collection optics for led array with offset hemispherical or faceted surfaces
US20050148881A1 (en) * 2003-12-19 2005-07-07 Fomitchov Ravel A. High-frequency intensity-modulated incoherent optical source for biomedical optical imaging
WO2006060783A2 (en) 2004-12-03 2006-06-08 Cytonome, Inc. Unitary cartridge for particle processing
US9260693B2 (en) 2004-12-03 2016-02-16 Cytonome/St, Llc Actuation of parallel microfluidic arrays
US7846391B2 (en) * 2006-05-22 2010-12-07 Lumencor, Inc. Bioanalytical instrumentation using a light source subsystem
US7709811B2 (en) * 2007-07-03 2010-05-04 Conner Arlie R Light emitting diode illumination system
US8098375B2 (en) 2007-08-06 2012-01-17 Lumencor, Inc. Light emitting diode illumination system
US8242462B2 (en) 2009-01-23 2012-08-14 Lumencor, Inc. Lighting design of high quality biomedical devices
EP2393596B1 (en) * 2009-02-09 2016-09-28 Whitespace Enterprise Corporation Microfluidic devices and methods of providing a storable sample
US8466436B2 (en) 2011-01-14 2013-06-18 Lumencor, Inc. System and method for metered dosage illumination in a bioanalysis or other system
US8389957B2 (en) 2011-01-14 2013-03-05 Lumencor, Inc. System and method for metered dosage illumination in a bioanalysis or other system
US8967811B2 (en) 2012-01-20 2015-03-03 Lumencor, Inc. Solid state continuous white light source
US9217561B2 (en) 2012-06-15 2015-12-22 Lumencor, Inc. Solid state light source for photocuring
US9754985B1 (en) * 2013-03-06 2017-09-05 Lockheed Martin Corporation Interferometer array imaging system using photonic integrated circuit cards
GB2544198B (en) 2014-05-21 2021-01-13 Integenx Inc Fluidic cartridge with valve mechanism
EP3209410A4 (en) 2014-10-22 2018-05-02 IntegenX Inc. Systems and methods for sample preparation, processing and analysis
US11604162B2 (en) 2017-02-24 2023-03-14 Life Technologies Corporation Optical systems and methods for sample separation
EP3812741A4 (en) * 2018-06-22 2022-06-22 Hitachi High-Tech Corporation Electrophoresis apparatus

Family Cites Families (20)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4729947A (en) 1984-03-29 1988-03-08 The Board Of Regents Of The University Of Nebraska DNA sequencing
US4639074A (en) 1984-06-18 1987-01-27 At&T Bell Laboratories Fiber-waveguide self alignment coupler
US4927265A (en) 1988-04-29 1990-05-22 501 Microphoretic Systems, Inc. Detector for fluorescence and absorption spectroscopy
US5274240A (en) 1990-01-12 1993-12-28 The Regents Of The University Of California Capillary array confocal fluorescence scanner and method
US5516409A (en) 1991-02-28 1996-05-14 Hitachi, Ltd. DNA detector and DNA detection method
US5114551A (en) 1991-09-30 1992-05-19 Bio-Rad Laboratories, Inc. Multi-point detection method for electrophoresis and chromatography in capillaries
US5312535A (en) 1992-07-17 1994-05-17 Beckman Instruments, Inc. Capillary electrophoresis detection
US5736410A (en) 1992-09-14 1998-04-07 Sri International Up-converting reporters for biological and other assays using laser excitation techniques
US5324401A (en) 1993-02-05 1994-06-28 Iowa State University Research Foundation, Inc. Multiplexed fluorescence detector system for capillary electrophoresis
US5359686A (en) 1993-03-29 1994-10-25 Motorola, Inc. Interface for coupling optical fibers to electronic circuitry
US5439578A (en) 1993-06-03 1995-08-08 The Governors Of The University Of Alberta Multiple capillary biochemical analyzer
US5580471A (en) 1994-03-30 1996-12-03 Panasonic Technologies, Inc. Apparatus and method for material treatment and inspection using fiber-coupled laser diode
US5583736A (en) 1994-11-17 1996-12-10 The United States Of America As Represented By The Department Of Energy Micromachined silicon electrostatic chuck
US5710628A (en) 1994-12-12 1998-01-20 Visible Genetics Inc. Automated electrophoresis and fluorescence detection apparatus and method
US5582705A (en) 1995-05-19 1996-12-10 Iowa State University Research Foundation, Inc. Multiplexed capillary electrophoresis system
JP3515646B2 (en) 1995-09-18 2004-04-05 大塚電子株式会社 Multi-capillary electrophoresis device
US5784157A (en) * 1995-11-21 1998-07-21 The Research Foundation Of State University Of New York Method and apparatus for identifying fluorophores
US5867266A (en) 1996-04-17 1999-02-02 Cornell Research Foundation, Inc. Multiple optical channels for chemical analysis
EP0901620B1 (en) 1996-05-28 2002-01-09 Zeptosens AG Optical detection apparatus for chemical analyses of small volumes of samples
US5903348A (en) 1997-03-12 1999-05-11 Nz Applied Technologies, Inc. System and method for molecular sample measurements

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9281001B2 (en) 2004-11-08 2016-03-08 Phoseon Technology, Inc. Methods and systems relating to light sources for use in industrial processes

Also Published As

Publication number Publication date
AU5778000A (en) 2001-01-22
WO2001002846A1 (en) 2001-01-11
WO2001002846A9 (en) 2002-07-25
US6445448B1 (en) 2002-09-03
US6404495B1 (en) 2002-06-11

Similar Documents

Publication Publication Date Title
WO2001002846A8 (en) System and method for molecular sample measurement
DE60136797D1 (en) MICROFLUIDIC ANALYSIS SYSTEMS AND METHODS WITH EXTREMELY HIGH THROUGHPUT
EP1485191B1 (en) Mixed mode microfluidic system and method
US6126804A (en) Integrated polymerase chain reaction/electrophoresis instrument
US5846727A (en) Microsystem for rapid DNA sequencing
AU2002247040A1 (en) Multi-channel bio-separation cartridge
WO2008028160A3 (en) Substrates, systems and methods for analyzing materials
WO2003019139A3 (en) Multi-channel analyte-separation device employing side-entry excitation
WO2002044703A3 (en) High throughput capillary electrophoresis system
WO2003052141A3 (en) High troughput analysis and detection of multiple target sequences using circular probes
AU2002242004A1 (en) Optical detection in a multi-channel bio-separation system
DK1159453T3 (en) Method of Direct Nucleic Acid Sequencing
EP2199784A3 (en) Multiplex capillary electrophoresis system
TW200942621A (en) Apparatus for nucleic acid sequencing by Raman spectroscopy
DK1157264T3 (en) Biochemical purification devices with immobilized capture probes and applications thereof
ATE157452T1 (en) BIOCHEMICAL MULTIPLE CAPILLARY ANALYZER
FI961034A0 (en) Self-addressable, self-installable microelectronic systems and devices for molecular biological analysis and diagnostics
ATE265889T1 (en) APPARATUS AND METHOD FOR DROP MICROCHEMISTRY
US6788414B1 (en) Method of analyzing multiple sample simultaneously by detecting absorption and systems for use in such a method
WO2004033720A3 (en) Analytical chip for detection of 16s-rrna from clinically relevant bacteria and analytical method based thereon
WO2001090748A3 (en) High-throughput methods of distinguishing at least one molecule individually in a sample comprising multiple molecules and systems for use therein
DK0763101T3 (en) Nucleic acid sequences and expression systems for heparinase III derived from Flavobacterium heparinum
WO2003091713A3 (en) System and method of measuring molecular interactions
WO2002037944A3 (en) Multiplexed cell analysis system
GB2377272A (en) Method and apparatus for DNA sequencing

Legal Events

Date Code Title Description
AK Designated states

Kind code of ref document: A1

Designated state(s): AE AG AL AM AT AU AZ BA BB BG BR BY BZ CA CH CN CR CU CZ DE DK DM DZ EE ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KP KR KZ LC LK LR LS LT LU LV MA MD MG MK MN MW MX MZ NO NZ PL PT RO RU SD SE SG SI SK SL TJ TM TR TT TZ UA UG UZ VN YU ZA ZW

AL Designated countries for regional patents

Kind code of ref document: A1

Designated state(s): GH GM KE LS MW MZ SD SL SZ TZ UG ZW AM AZ BY KG KZ MD RU TJ TM AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE BF BJ CF CG CI CM GA GN GW ML MR NE SN TD TG

121 Ep: the epo has been informed by wipo that ep was designated in this application
DFPE Request for preliminary examination filed prior to expiration of 19th month from priority date (pct application filed before 20040101)
AK Designated states

Kind code of ref document: C1

Designated state(s): AE AG AL AM AT AU AZ BA BB BG BR BY BZ CA CH CN CR CU CZ DE DK DM DZ EE ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KP KR KZ LC LK LR LS LT LU LV MA MD MG MK MN MW MX MZ NO NZ PL PT RO RU SD SE SG SI SK SL TJ TM TR TT TZ UA UG UZ VN YU ZA ZW

AL Designated countries for regional patents

Kind code of ref document: C1

Designated state(s): GH GM KE LS MW MZ SD SL SZ TZ UG ZW AM AZ BY KG KZ MD RU TJ TM AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE BF BJ CF CG CI CM GA GN GW ML MR NE SN TD TG

CFP Corrected version of a pamphlet front page
CR1 Correction of entry in section i
REG Reference to national code

Ref country code: DE

Ref legal event code: 8642

AK Designated states

Kind code of ref document: C2

Designated state(s): AE AG AL AM AT AU AZ BA BB BG BR BY BZ CA CH CN CR CU CZ DE DK DM DZ EE ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KP KR KZ LC LK LR LS LT LU LV MA MD MG MK MN MW MX MZ NO NZ PL PT RO RU SD SE SG SI SK SL TJ TM TR TT TZ UA UG UZ VN YU ZA ZW

AL Designated countries for regional patents

Kind code of ref document: C2

Designated state(s): GH GM KE LS MW MZ SD SL SZ TZ UG ZW AM AZ BY KG KZ MD RU TJ TM AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE BF BJ CF CG CI CM GA GN GW ML MR NE SN TD TG

COP Corrected version of pamphlet

Free format text: PAGES 1/13, 2/13, 4/13, 7/13 AND 8/13, DRAWINGS, REPLACED BY NEW PAGES 1/13, 2/13, 4/13, 7/13 AND 8/13; DUE TO LATE TRANSMITTAL BY THE RECEIVING OFFICE

122 Ep: pct application non-entry in european phase
NENP Non-entry into the national phase

Ref country code: JP