CAD, a multienzymatic protein at the head of de novo pyrimidine biosynthesis
F del Caño-Ochoa, M Moreno-Morcillo… - … Protein Complexes II …, 2019 - Springer
… DHO is a ubiquitous Zn metalloenzyme catalyzing the … of the pyrimidine ring– in the third
step of the de novo pyrimidine … molecule bridging Zn-α and Zn-β is displaced by the binding of …
step of the de novo pyrimidine … molecule bridging Zn-α and Zn-β is displaced by the binding of …
De novo pyrimidine nucleotide synthesis
RL Switzer, CL Quinn - Bacillus subtilis and Other Gram …, 1993 - Wiley Online Library
… The pathway of biosynthesis of pyrimidine nucleoн tides de novo … twoto fivefold by anions
such as acetate, citrate, lactate, … is likely that two or three of these are involved in binding Zn 2 …
such as acetate, citrate, lactate, … is likely that two or three of these are involved in binding Zn 2 …
Pyrimidine nucleotide biosynthesis in animals: genes, enzymes, and regulation of UMP biosynthesis
ME Jones - Annual review of biochemistry, 1980 - annualreviews.org
… The second gene required for de novo biosynthesis of UMP … of either the essential histidine
or a hydrated zinc atom (89). The … Generally these forms are determined by the anions in the …
or a hydrated zinc atom (89). The … Generally these forms are determined by the anions in the …
Pyrimidine biosynthesis in pathogens–structures and analysis of dihydroorotases from Yersinia pestis and Vibrio cholerae
J Lipowska, CD Miks, K Kwon, L Shuvalova… - International journal of …, 2019 - Elsevier
… de novo pyrimidine biosynthesis pathway is conducted by DHO (EC 3.5.2.3) – a zinc
metalloenzyme … to affect substrate binding significantly; we assume that the substrate binding in …
metalloenzyme … to affect substrate binding significantly; we assume that the substrate binding in …
Inhibitors of de novo nucleotide biosynthesis as drugs
RI Christopherson, SD Lyons… - Accounts of chemical …, 2002 - ACS Publications
… a zinc atom which is tightly bound … zinc atom at the active site. Although design of this
phosphinothioic acid incorporated multiple structural attributes which individually promote binding …
phosphinothioic acid incorporated multiple structural attributes which individually promote binding …
Structure, mechanism, and substrate profiles of the trinuclear metallophosphatases from the amidohydrolase superfamily
SV Ghodge, FM Raushel - Methods in Enzymology, 2018 - Elsevier
… phosphate mimic bound (PDB: 4GC3 ), products bound (PDB… formation of an alkoxide anion
intermediate that is initially … help inform efforts for de novo protein design and engineering of …
intermediate that is initially … help inform efforts for de novo protein design and engineering of …
[PDF][PDF] The structure of adenylosuccinate lyase, an enzyme with dual activity in the de novo purine biosynthetic pathway
EA Toth, TO Yeates - Structure, 2000 - cell.com
… between proteins in this superfamily we superimposed the … the residues involved in substrate
binding and catalysis in ASL. … purified using a Q-sepharose anion-exchange column (40 ml …
binding and catalysis in ASL. … purified using a Q-sepharose anion-exchange column (40 ml …
Deciphering CAD: Structure and function of a mega‐enzymatic pyrimidine factory in health and disease
F del Caño‐Ochoa, S Ramón‐Maiques - Protein Science, 2021 - Wiley Online Library
… one of the initial reactions for de novo biosynthesis of pyrimidine nucleotides: glutaminase-…
of a rare histidine with negative charge (histidinate anion) (Figure 3f). This third Zn 2+ ion has …
of a rare histidine with negative charge (histidinate anion) (Figure 3f). This third Zn 2+ ion has …
[PDF][PDF] Structure, functional characterization, and evolution of the dihydroorotase domain of human CAD
A Grande-García, N Lallous, C Díaz-Tejada… - Structure, 2014 - cell.com
… controls the de novo biosynthesis of pyrimidines in animals, is … Furthermore, we found a
third Zn bound to a histidinate ion … in the rare form of a histidinate anion. Not surprisingly, given …
third Zn bound to a histidinate ion … in the rare form of a histidinate anion. Not surprisingly, given …
[PDF][PDF] The structure of SAICAR synthase: an enzyme in the de novo pathway of purine nucleotide biosynthesis
VM Levdikov, VV Barynin, AI Grebenko… - Structure, 1998 - cell.com
… Together these enzymes form a new superfamily of mononucleotide-binding domains. There
appears to be no other enzyme, however, which is composed of the same combination of …
appears to be no other enzyme, however, which is composed of the same combination of …