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rimJ ribosomal-protein-S5-alanine N-acetyltransferase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946910, updated on 2-May-2024

Summary

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Gene symbol
rimJ
Gene description
ribosomal-protein-S5-alanine N-acetyltransferase
Primary source
ASAP:ABE-0003622
Locus tag
b1066
See related
ECOCYC:EG10851
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1051; tcp
Summary
RimJ is an alanine acetyltransferase that is specific for ribosomal protein S5 . [More information is available at EcoCyc: EG10851].
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Genomic context

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Sequence:
NC_000913.3 (1125562..1126146)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene reduced glutaredoxin 2 Neighboring gene multidrug efflux pump MdtH Neighboring gene DUF480 domain-containing protein YceH Neighboring gene putative oxidoreductase YceM

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Production of N(α)-acetyl Tα1-HSA through in vitro acetylation by RimJ. Chen J, et al. Oncotarget, 2017 Nov 10. PMID 29221124, Free PMC Article
  2. Appropriate maturation and folding of 16S rRNA during 30S subunit biogenesis are critical for translational fidelity. Roy-Chaudhuri B, et al. Proc Natl Acad Sci U S A, 2010 Mar 9. PMID 20176963, Free PMC Article
  3. RimJ is responsible for N(alpha)-acetylation of thymosin alpha1 in Escherichia coli. Fang H, et al. Appl Microbiol Biotechnol, 2009 Aug. PMID 19352641
  4. The N-acetyltransferase RimJ responds to environmental stimuli to repress pap fimbrial transcription in Escherichia coli. White-Ziegler CA, et al. J Bacteriol, 2002 Aug. PMID 12142402, Free PMC Article
  5. Identification of an Escherichia coli genetic locus involved in thermoregulation of the pap operon. White-Ziegler CA, et al. J Bacteriol, 1990 Apr. PMID 2156803, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. RimJ is responsible for N(alpha)-acetylation of thymosin alpha1.
    Title: RimJ is responsible for N(alpha)-acetylation of thymosin alpha1 in Escherichia coli.
  2. rimJ as a high-copy suppressor of the cold-sensitive phenotype associated with the ribosomal protein S5(G28D) mutation.
    Title: Suppression of a cold-sensitive mutation in ribosomal protein S5 reveals a role for RimJ in ribosome biogenesis.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables N-acetyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
  
enables peptide-alanine-alpha-N-acetyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peptide-alanine-alpha-N-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables peptide-alanine-alpha-N-acetyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables peptide-serine-alpha-N-acetyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within maturation of SSU-rRNA IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within protein modification process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within ribosome biogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ribosomal-protein-S5-alanine N-acetyltransferase
NP_415584.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1125562..1126146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415584.1 ribosomal-protein-S5-alanine N-acetyltransferase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415584.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9A8K2
    Conserved Domains (1) summary
    PRK10809
    Location:1 → 194
    PRK10809; 30S ribosomal protein S5 alanine N-acetyltransferase
Nucleotide Protein
Heading Accession and Version

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